Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav6-6A0A075B603 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-6A0A075B603 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-6A0A075B603 Gm36858-201ENSMUST00000194501 2391 ntBASIC12.41□□□□□ -0.42
Trav6-6A0A075B603 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trav6-6A0A075B603 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC12.41□□□□□ -0.42
Trav6-6A0A075B603 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC12.41□□□□□ -0.42
Trav6-6A0A075B603 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trav6-6A0A075B603 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-6A0A075B603 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-6A0A075B603 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trav6-6A0A075B603 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-6A0A075B603 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-6A0A075B603 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-6A0A075B603 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-6A0A075B603 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-6A0A075B603 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-6A0A075B603 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-6A0A075B603 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-6A0A075B603 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-6A0A075B603 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-6A0A075B603 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-6A0A075B603 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-6A0A075B603 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-6A0A075B603 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-6A0A075B603 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-6A0A075B603 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-6A0A075B603 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC12.4□□□□□ -0.42
Trav6-6A0A075B603 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-6A0A075B603 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-6A0A075B603 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Trav6-6A0A075B603 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-6A0A075B603 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav6-6A0A075B603 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-6A0A075B603 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-6A0A075B603 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-6A0A075B603 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-6A0A075B603 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-6A0A075B603 Gm37820-201ENSMUST00000194021 2147 ntBASIC12.4□□□□□ -0.43
Trav6-6A0A075B603 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC12.4□□□□□ -0.43
Trav6-6A0A075B603 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav6-6A0A075B603 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav6-6A0A075B603 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav6-6A0A075B603 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-6A0A075B603 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-6A0A075B603 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-6A0A075B603 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-6A0A075B603 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Trav6-6A0A075B603 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Trav6-6A0A075B603 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-6A0A075B603 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-6A0A075B603 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-6A0A075B603 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-6A0A075B603 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-6A0A075B603 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC12.39□□□□□ -0.43
Trav6-6A0A075B603 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC12.39□□□□□ -0.43
Trav6-6A0A075B603 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-6A0A075B603 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-6A0A075B603 Mtag2-201ENSMUST00000058665 714 ntBASIC12.39□□□□□ -0.43
Trav6-6A0A075B603 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-6A0A075B603 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-6A0A075B603 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trav6-6A0A075B603 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-6A0A075B603 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-6A0A075B603 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-6A0A075B603 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trav6-6A0A075B603 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
Trav6-6A0A075B603 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-6A0A075B603 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-6A0A075B603 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-6A0A075B603 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-6A0A075B603 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trav6-6A0A075B603 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-6A0A075B603 Gm21596-201ENSMUST00000178049 1316 ntBASIC12.38□□□□□ -0.43
Trav6-6A0A075B603 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-6A0A075B603 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trav6-6A0A075B603 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC12.38□□□□□ -0.43
Trav6-6A0A075B603 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-6A0A075B603 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-6A0A075B603 Gm15375-201ENSMUST00000119510 849 ntBASIC12.38□□□□□ -0.43
Trav6-6A0A075B603 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav6-6A0A075B603 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-6A0A075B603 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-6A0A075B603 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav6-6A0A075B603 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-6A0A075B603 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-6A0A075B603 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-6A0A075B603 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-6A0A075B603 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-6A0A075B603 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trav6-6A0A075B603 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Trav6-6A0A075B603 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-6A0A075B603 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav6-6A0A075B603 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Trav6-6A0A075B603 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trav6-6A0A075B603 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-6A0A075B603 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-6A0A075B603 Dio3-201ENSMUST00000097228 1449 ntBASIC12.37□□□□□ -0.43
Trav6-6A0A075B603 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-6A0A075B603 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms