Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-1A0A075B5Z8 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav6-1A0A075B5Z8 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-1A0A075B5Z8 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-1A0A075B5Z8 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-1A0A075B5Z8 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-1A0A075B5Z8 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-1A0A075B5Z8 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-1A0A075B5Z8 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC13.35□□□□□ -0.27
Trav6-1A0A075B5Z8 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Trav6-1A0A075B5Z8 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-1A0A075B5Z8 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-1A0A075B5Z8 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-1A0A075B5Z8 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trav6-1A0A075B5Z8 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-1A0A075B5Z8 Gm37179-201ENSMUST00000194862 823 ntBASIC13.35□□□□□ -0.27
Trav6-1A0A075B5Z8 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-1A0A075B5Z8 Gm43183-201ENSMUST00000200632 547 ntBASIC13.35□□□□□ -0.27
Trav6-1A0A075B5Z8 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-1A0A075B5Z8 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC13.35□□□□□ -0.27
Trav6-1A0A075B5Z8 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-1A0A075B5Z8 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trav6-1A0A075B5Z8 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-1A0A075B5Z8 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-1A0A075B5Z8 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-1A0A075B5Z8 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-1A0A075B5Z8 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-1A0A075B5Z8 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-1A0A075B5Z8 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC13.35□□□□□ -0.27
Trav6-1A0A075B5Z8 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Trav6-1A0A075B5Z8 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-1A0A075B5Z8 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-1A0A075B5Z8 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-1A0A075B5Z8 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6-1A0A075B5Z8 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav6-1A0A075B5Z8 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.34□□□□□ -0.27
Trav6-1A0A075B5Z8 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trav6-1A0A075B5Z8 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6-1A0A075B5Z8 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6-1A0A075B5Z8 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Trav6-1A0A075B5Z8 H2-K2-201ENSMUST00000174250 1049 ntBASIC13.34□□□□□ -0.27
Trav6-1A0A075B5Z8 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trav6-1A0A075B5Z8 Gm27275-201ENSMUST00000184318 272 ntBASIC13.34□□□□□ -0.27
Trav6-1A0A075B5Z8 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC13.34□□□□□ -0.27
Trav6-1A0A075B5Z8 Gm5297-201ENSMUST00000198555 1171 ntBASIC13.34□□□□□ -0.27
Trav6-1A0A075B5Z8 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trav6-1A0A075B5Z8 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6-1A0A075B5Z8 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav6-1A0A075B5Z8 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6-1A0A075B5Z8 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6-1A0A075B5Z8 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6-1A0A075B5Z8 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6-1A0A075B5Z8 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trav6-1A0A075B5Z8 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6-1A0A075B5Z8 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
Trav6-1A0A075B5Z8 AC124581.1-201ENSMUST00000225416 1399 ntBASIC13.33□□□□□ -0.27
Trav6-1A0A075B5Z8 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav6-1A0A075B5Z8 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-1A0A075B5Z8 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-1A0A075B5Z8 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-1A0A075B5Z8 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-1A0A075B5Z8 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-1A0A075B5Z8 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trav6-1A0A075B5Z8 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-1A0A075B5Z8 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-1A0A075B5Z8 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-1A0A075B5Z8 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC13.33□□□□□ -0.28
Trav6-1A0A075B5Z8 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC13.33□□□□□ -0.28
Trav6-1A0A075B5Z8 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC13.33□□□□□ -0.28
Trav6-1A0A075B5Z8 Il3ra-202ENSMUST00000223589 738 ntBASIC13.33□□□□□ -0.28
Trav6-1A0A075B5Z8 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-1A0A075B5Z8 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.33□□□□□ -0.28
Trav6-1A0A075B5Z8 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-1A0A075B5Z8 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-1A0A075B5Z8 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-1A0A075B5Z8 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-1A0A075B5Z8 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-1A0A075B5Z8 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-1A0A075B5Z8 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-1A0A075B5Z8 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-1A0A075B5Z8 Gm45203-201ENSMUST00000206384 1831 ntBASIC13.32□□□□□ -0.28
Trav6-1A0A075B5Z8 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-1A0A075B5Z8 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-1A0A075B5Z8 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-1A0A075B5Z8 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-1A0A075B5Z8 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-1A0A075B5Z8 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-1A0A075B5Z8 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-1A0A075B5Z8 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-1A0A075B5Z8 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-1A0A075B5Z8 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-1A0A075B5Z8 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-1A0A075B5Z8 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-1A0A075B5Z8 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-1A0A075B5Z8 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav6-1A0A075B5Z8 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav6-1A0A075B5Z8 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-1A0A075B5Z8 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-1A0A075B5Z8 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-1A0A075B5Z8 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms