Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.86□□□□□ -1.63
RFX7Q2KHR2 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.86□□□□□ -1.63
RFX7Q2KHR2 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.86□□□□□ -1.63
RFX7Q2KHR2 AC012603.1-201ENST00000606424 528 ntBASIC4.86□□□□□ -1.63
RFX7Q2KHR2 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.86□□□□□ -1.63
RFX7Q2KHR2 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RFX7Q2KHR2 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
RFX7Q2KHR2 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RFX7Q2KHR2 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RFX7Q2KHR2 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RFX7Q2KHR2 MAPK10-253ENST00000641010 4072 ntBASIC4.85□□□□□ -1.63
RFX7Q2KHR2 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.85□□□□□ -1.63
RFX7Q2KHR2 SNORD35B-201ENST00000363660 87 ntBASIC4.85□□□□□ -1.63
RFX7Q2KHR2 MIR1251-201ENST00000408552 70 ntBASIC4.85□□□□□ -1.63
RFX7Q2KHR2 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.85□□□□□ -1.63
RFX7Q2KHR2 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RFX7Q2KHR2 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.85□□□□□ -1.63
RFX7Q2KHR2 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.85□□□□□ -1.63
RFX7Q2KHR2 AL133547.1-201ENST00000448546 220 ntBASIC4.85□□□□□ -1.63
RFX7Q2KHR2 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RFX7Q2KHR2 AC092691.2-201ENST00000461787 803 ntBASIC4.85□□□□□ -1.63
RFX7Q2KHR2 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RFX7Q2KHR2 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RFX7Q2KHR2 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.85□□□□□ -1.63
RFX7Q2KHR2 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.85□□□□□ -1.63
RFX7Q2KHR2 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.85□□□□□ -1.63
RFX7Q2KHR2 AC091516.1-201ENST00000549191 703 ntBASIC4.85□□□□□ -1.63
RFX7Q2KHR2 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.85□□□□□ -1.63
RFX7Q2KHR2 HSPE1P5-201ENST00000561489 272 ntBASIC4.85□□□□□ -1.63
RFX7Q2KHR2 AC120057.2-201ENST00000571520 271 ntBASIC4.85□□□□□ -1.63
RFX7Q2KHR2 AP005901.4-201ENST00000577336 569 ntBASIC4.85□□□□□ -1.63
RFX7Q2KHR2 AC110743.1-201ENST00000584870 478 ntBASIC4.85□□□□□ -1.63
RFX7Q2KHR2 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.85□□□□□ -1.63
RFX7Q2KHR2 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RFX7Q2KHR2 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.85□□□□□ -1.63
RFX7Q2KHR2 AC128687.2-201ENST00000609657 566 ntBASIC4.85□□□□□ -1.63
RFX7Q2KHR2 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC4.85□□□□□ -1.63
RFX7Q2KHR2 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.85□□□□□ -1.63
RFX7Q2KHR2 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RFX7Q2KHR2 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.85□□□□□ -1.63
RFX7Q2KHR2 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
RFX7Q2KHR2 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
RFX7Q2KHR2 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
RFX7Q2KHR2 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
RFX7Q2KHR2 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RFX7Q2KHR2 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RFX7Q2KHR2 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RFX7Q2KHR2 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.85□□□□□ -1.63
RFX7Q2KHR2 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.85□□□□□ -1.63
RFX7Q2KHR2 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
RFX7Q2KHR2 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
RFX7Q2KHR2 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RFX7Q2KHR2 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RFX7Q2KHR2 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RFX7Q2KHR2 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.84□□□□□ -1.63
RFX7Q2KHR2 RNA5SP399-201ENST00000364003 117 ntBASIC4.84□□□□□ -1.63
RFX7Q2KHR2 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
RFX7Q2KHR2 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RFX7Q2KHR2 RPL7P2-201ENST00000427639 268 ntBASIC4.84□□□□□ -1.63
RFX7Q2KHR2 AC018644.1-201ENST00000429934 551 ntBASIC4.84□□□□□ -1.63
RFX7Q2KHR2 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.84□□□□□ -1.63
RFX7Q2KHR2 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.84□□□□□ -1.63
RFX7Q2KHR2 VN1R34P-201ENST00000447387 883 ntBASIC4.84□□□□□ -1.63
RFX7Q2KHR2 AL358232.1-201ENST00000448030 501 ntBASIC4.84□□□□□ -1.63
RFX7Q2KHR2 AL500522.2-201ENST00000448562 343 ntBASIC4.84□□□□□ -1.63
RFX7Q2KHR2 AC110792.1-201ENST00000491826 472 ntBASIC4.84□□□□□ -1.63
RFX7Q2KHR2 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.84□□□□□ -1.63
RFX7Q2KHR2 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.84□□□□□ -1.63
RFX7Q2KHR2 AL592436.1-201ENST00000605135 558 ntBASIC4.84□□□□□ -1.63
RFX7Q2KHR2 AC090912.3-201ENST00000609775 533 ntBASIC4.84□□□□□ -1.63
RFX7Q2KHR2 AC015722.2-201ENST00000622210 551 ntBASIC4.84□□□□□ -1.63
RFX7Q2KHR2 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.84□□□□□ -1.63
RFX7Q2KHR2 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RFX7Q2KHR2 AC016588.2-201ENST00000632484 3021 ntBASIC4.83□□□□□ -1.64
RFX7Q2KHR2 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.83□□□□□ -1.64
RFX7Q2KHR2 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.83□□□□□ -1.64
RFX7Q2KHR2 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.83□□□□□ -1.64
RFX7Q2KHR2 SNORA71.3-201ENST00000362582 128 ntBASIC4.83□□□□□ -1.64
RFX7Q2KHR2 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.83□□□□□ -1.64
RFX7Q2KHR2 BX119904.1-201ENST00000432026 348 ntBASIC4.83□□□□□ -1.64
RFX7Q2KHR2 AC007389.2-201ENST00000434630 306 ntBASIC4.83□□□□□ -1.64
RFX7Q2KHR2 TMX2P1-201ENST00000436507 708 ntBASIC4.83□□□□□ -1.64
RFX7Q2KHR2 NANOGP10-201ENST00000453325 895 ntBASIC4.83□□□□□ -1.64
RFX7Q2KHR2 RPS4XP15-201ENST00000489210 795 ntBASIC4.83□□□□□ -1.64
RFX7Q2KHR2 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.83□□□□□ -1.64
RFX7Q2KHR2 GNRHR2P1-201ENST00000555315 631 ntBASIC4.83□□□□□ -1.64
RFX7Q2KHR2 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.83□□□□□ -1.64
RFX7Q2KHR2 AC024220.1-201ENST00000603675 484 ntBASIC4.83□□□□□ -1.64
RFX7Q2KHR2 AC006840.1-201ENST00000623069 542 ntBASIC4.83□□□□□ -1.64
RFX7Q2KHR2 AC124312.6-202ENST00000623624 418 ntBASIC4.83□□□□□ -1.64
RFX7Q2KHR2 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
RFX7Q2KHR2 OR5AQ1P-202ENST00000641257 1534 ntBASIC4.83□□□□□ -1.64
RFX7Q2KHR2 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
RFX7Q2KHR2 OR4G1P-202ENST00000641173 1788 ntBASIC4.83□□□□□ -1.64
RFX7Q2KHR2 AC068254.2-201ENST00000623938 3577 ntBASIC4.83□□□□□ -1.64
RFX7Q2KHR2 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
RFX7Q2KHR2 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
RFX7Q2KHR2 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
RFX7Q2KHR2 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RFX7Q2KHR2 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms