Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 PHKBP1-201ENST00000450951 1951 ntBASIC4.02□□□□□ -1.77
LIM2P55344 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.02□□□□□ -1.77
LIM2P55344 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LIM2P55344 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
LIM2P55344 AC126755.2-208ENST00000327792 462 ntBASIC4.02□□□□□ -1.77
LIM2P55344 AC138969.1-213ENST00000331436 462 ntBASIC4.02□□□□□ -1.77
LIM2P55344 RPS27AP11-201ENST00000402798 447 ntBASIC4.02□□□□□ -1.77
LIM2P55344 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.02□□□□□ -1.77
LIM2P55344 RPL23AP26-201ENST00000412728 464 ntBASIC4.02□□□□□ -1.77
LIM2P55344 TRGV6-201ENST00000417928 299 ntBASIC4.02□□□□□ -1.77
LIM2P55344 CHIAP3-201ENST00000423668 1133 ntBASIC4.02□□□□□ -1.77
LIM2P55344 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.02□□□□□ -1.77
LIM2P55344 MTATP6P11-201ENST00000428071 670 ntBASIC4.02□□□□□ -1.77
LIM2P55344 EEF1A1P1-201ENST00000447052 739 ntBASIC4.02□□□□□ -1.77
LIM2P55344 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.02□□□□□ -1.77
LIM2P55344 AC009220.1-201ENST00000451614 275 ntBASIC4.02□□□□□ -1.77
LIM2P55344 AC243772.1-201ENST00000451620 410 ntBASIC4.02□□□□□ -1.77
LIM2P55344 AC009963.2-201ENST00000453431 138 ntBASIC4.02□□□□□ -1.77
LIM2P55344 RPL10P17-201ENST00000453852 316 ntBASIC4.02□□□□□ -1.77
LIM2P55344 AP000942.1-201ENST00000463969 747 ntBASIC4.02□□□□□ -1.77
LIM2P55344 RN7SL809P-201ENST00000482040 297 ntBASIC4.02□□□□□ -1.77
LIM2P55344 AC041039.1-201ENST00000485656 536 ntBASIC4.02□□□□□ -1.77
LIM2P55344 AC106806.2-201ENST00000509365 500 ntBASIC4.02□□□□□ -1.77
LIM2P55344 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.02□□□□□ -1.77
LIM2P55344 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.02□□□□□ -1.77
LIM2P55344 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.02□□□□□ -1.77
LIM2P55344 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.02□□□□□ -1.77
LIM2P55344 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.02□□□□□ -1.77
LIM2P55344 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
LIM2P55344 AC008083.2-201ENST00000546707 476 ntBASIC4.02□□□□□ -1.77
LIM2P55344 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.02□□□□□ -1.77
LIM2P55344 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.02□□□□□ -1.77
LIM2P55344 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.02□□□□□ -1.77
LIM2P55344 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.02□□□□□ -1.77
LIM2P55344 AF230666.2-201ENST00000602328 725 ntBASIC4.02□□□□□ -1.77
LIM2P55344 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.02□□□□□ -1.77
LIM2P55344 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.02□□□□□ -1.77
LIM2P55344 AL645927.2-201ENST00000618350 349 ntBASIC4.02□□□□□ -1.77
LIM2P55344 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC4.02□□□□□ -1.77
LIM2P55344 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.02□□□□□ -1.77
LIM2P55344 AC073592.7-201ENST00000623659 507 ntBASIC4.02□□□□□ -1.77
LIM2P55344 AP002967.1-201ENST00000624203 539 ntBASIC4.02□□□□□ -1.77
LIM2P55344 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.02□□□□□ -1.77
LIM2P55344 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.02□□□□□ -1.77
LIM2P55344 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LIM2P55344 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LIM2P55344 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.02□□□□□ -1.77
LIM2P55344 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LIM2P55344 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LIM2P55344 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
LIM2P55344 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.02□□□□□ -1.77
LIM2P55344 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.01□□□□□ -1.77
LIM2P55344 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.01□□□□□ -1.77
LIM2P55344 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
LIM2P55344 AC011266.1-201ENST00000624119 3569 ntBASIC4.01□□□□□ -1.77
LIM2P55344 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
LIM2P55344 MIR141-201ENST00000384975 95 ntBASIC4.01□□□□□ -1.77
LIM2P55344 MIR93-201ENST00000385024 80 ntBASIC4.01□□□□□ -1.77
LIM2P55344 Y_RNA.625-201ENST00000411256 107 ntBASIC4.01□□□□□ -1.77
LIM2P55344 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.01□□□□□ -1.77
LIM2P55344 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.01□□□□□ -1.77
LIM2P55344 AC004690.1-201ENST00000418216 328 ntBASIC4.01□□□□□ -1.77
LIM2P55344 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.01□□□□□ -1.77
LIM2P55344 GTF2IP2-201ENST00000424290 697 ntBASIC4.01□□□□□ -1.77
LIM2P55344 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.01□□□□□ -1.77
LIM2P55344 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC4.01□□□□□ -1.77
LIM2P55344 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.01□□□□□ -1.77
LIM2P55344 AL513321.1-201ENST00000441175 761 ntBASIC4.01□□□□□ -1.77
LIM2P55344 AL591623.2-201ENST00000449978 222 ntBASIC4.01□□□□□ -1.77
LIM2P55344 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.01□□□□□ -1.77
LIM2P55344 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.01□□□□□ -1.77
LIM2P55344 NFU1-207ENST00000462320 558 ntTSL 4 BASIC4.01□□□□□ -1.77
LIM2P55344 AC010469.1-201ENST00000463864 576 ntBASIC4.01□□□□□ -1.77
LIM2P55344 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.01□□□□□ -1.77
LIM2P55344 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.01□□□□□ -1.77
LIM2P55344 PARP4P3-201ENST00000510265 317 ntBASIC4.01□□□□□ -1.77
LIM2P55344 KCTD9P2-201ENST00000512203 1013 ntBASIC4.01□□□□□ -1.77
LIM2P55344 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.01□□□□□ -1.77
LIM2P55344 RNA5SP154-201ENST00000516193 111 ntBASIC4.01□□□□□ -1.77
LIM2P55344 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
LIM2P55344 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.01□□□□□ -1.77
LIM2P55344 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
LIM2P55344 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.01□□□□□ -1.77
LIM2P55344 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC4.01□□□□□ -1.77
LIM2P55344 TVP23BP1-201ENST00000557500 617 ntBASIC4.01□□□□□ -1.77
LIM2P55344 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.01□□□□□ -1.77
LIM2P55344 MIR3138-201ENST00000585238 82 ntBASIC4.01□□□□□ -1.77
LIM2P55344 KATNBL1P5-201ENST00000605015 517 ntBASIC4.01□□□□□ -1.77
LIM2P55344 AC135178.6-201ENST00000605314 398 ntBASIC4.01□□□□□ -1.77
LIM2P55344 MIR432-201ENST00000606207 94 ntBASIC4.01□□□□□ -1.77
LIM2P55344 AL445423.1-201ENST00000609941 536 ntBASIC4.01□□□□□ -1.77
LIM2P55344 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.01□□□□□ -1.77
LIM2P55344 AC009237.17-201ENST00000618111 748 ntBASIC4.01□□□□□ -1.77
LIM2P55344 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.01□□□□□ -1.77
LIM2P55344 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.01□□□□□ -1.77
LIM2P55344 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.01□□□□□ -1.77
LIM2P55344 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
LIM2P55344 AC016588.2-201ENST00000632484 3021 ntBASIC4.01□□□□□ -1.77
LIM2P55344 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
LIM2P55344 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms