Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
TRIM49D1C9J1S8 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.04□□□□□ -1.76
TRIM49D1C9J1S8 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.04□□□□□ -1.76
TRIM49D1C9J1S8 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.04□□□□□ -1.76
TRIM49D1C9J1S8 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.04□□□□□ -1.76
TRIM49D1C9J1S8 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.04□□□□□ -1.76
TRIM49D1C9J1S8 MIR5684-201ENST00000585074 65 ntBASIC4.04□□□□□ -1.76
TRIM49D1C9J1S8 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.04□□□□□ -1.76
TRIM49D1C9J1S8 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.04□□□□□ -1.76
TRIM49D1C9J1S8 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC4.04□□□□□ -1.76
TRIM49D1C9J1S8 AL591424.2-201ENST00000617023 128 ntBASIC4.04□□□□□ -1.76
TRIM49D1C9J1S8 RN7SL722P-201ENST00000617780 284 ntBASIC4.04□□□□□ -1.76
TRIM49D1C9J1S8 RN7SL565P-201ENST00000618246 284 ntBASIC4.04□□□□□ -1.76
TRIM49D1C9J1S8 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
TRIM49D1C9J1S8 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.04□□□□□ -1.76
TRIM49D1C9J1S8 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TRIM49D1C9J1S8 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TRIM49D1C9J1S8 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.04□□□□□ -1.76
TRIM49D1C9J1S8 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
TRIM49D1C9J1S8 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TRIM49D1C9J1S8 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TRIM49D1C9J1S8 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
TRIM49D1C9J1S8 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
TRIM49D1C9J1S8 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.03□□□□□ -1.76
TRIM49D1C9J1S8 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TRIM49D1C9J1S8 RNA5SP502-201ENST00000362694 119 ntBASIC4.03□□□□□ -1.76
TRIM49D1C9J1S8 RNA5SP443-201ENST00000363083 132 ntBASIC4.03□□□□□ -1.76
TRIM49D1C9J1S8 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TRIM49D1C9J1S8 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TRIM49D1C9J1S8 RNU6-398P-201ENST00000384143 109 ntBASIC4.03□□□□□ -1.76
TRIM49D1C9J1S8 MIR708-201ENST00000390708 88 ntBASIC4.03□□□□□ -1.76
TRIM49D1C9J1S8 MIR1251-201ENST00000408552 70 ntBASIC4.03□□□□□ -1.76
TRIM49D1C9J1S8 Y_RNA.625-201ENST00000411256 107 ntBASIC4.03□□□□□ -1.76
TRIM49D1C9J1S8 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.03□□□□□ -1.76
TRIM49D1C9J1S8 NPM1P34-201ENST00000428821 893 ntBASIC4.03□□□□□ -1.76
TRIM49D1C9J1S8 TRIM60P13-201ENST00000432350 1283 ntBASIC4.03□□□□□ -1.76
TRIM49D1C9J1S8 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.03□□□□□ -1.76
TRIM49D1C9J1S8 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.03□□□□□ -1.76
TRIM49D1C9J1S8 RAD1P2-201ENST00000446414 663 ntBASIC4.03□□□□□ -1.76
TRIM49D1C9J1S8 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.03□□□□□ -1.76
TRIM49D1C9J1S8 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.03□□□□□ -1.76
TRIM49D1C9J1S8 RPL7P1-201ENST00000468161 747 ntBASIC4.03□□□□□ -1.76
TRIM49D1C9J1S8 RPL7P9-201ENST00000468715 747 ntBASIC4.03□□□□□ -1.76
TRIM49D1C9J1S8 RN7SL738P-201ENST00000470264 297 ntBASIC4.03□□□□□ -1.76
TRIM49D1C9J1S8 AC016687.1-201ENST00000482574 353 ntBASIC4.03□□□□□ -1.76
TRIM49D1C9J1S8 RN7SL271P-201ENST00000487601 295 ntBASIC4.03□□□□□ -1.76
TRIM49D1C9J1S8 AC093720.1-201ENST00000505681 714 ntBASIC4.03□□□□□ -1.76
TRIM49D1C9J1S8 BTF3L4P4-201ENST00000506381 449 ntBASIC4.03□□□□□ -1.76
TRIM49D1C9J1S8 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC4.03□□□□□ -1.76
TRIM49D1C9J1S8 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.03□□□□□ -1.76
TRIM49D1C9J1S8 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.03□□□□□ -1.76
TRIM49D1C9J1S8 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.03□□□□□ -1.76
TRIM49D1C9J1S8 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.03□□□□□ -1.76
TRIM49D1C9J1S8 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.03□□□□□ -1.76
TRIM49D1C9J1S8 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC4.03□□□□□ -1.76
TRIM49D1C9J1S8 AC025627.2-201ENST00000576220 160 ntBASIC4.03□□□□□ -1.76
TRIM49D1C9J1S8 VN1R81P-201ENST00000602085 372 ntBASIC4.03□□□□□ -1.76
TRIM49D1C9J1S8 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TRIM49D1C9J1S8 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.03□□□□□ -1.76
TRIM49D1C9J1S8 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TRIM49D1C9J1S8 UBE3AP2-201ENST00000429033 2259 ntBASIC4.03□□□□□ -1.76
TRIM49D1C9J1S8 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TRIM49D1C9J1S8 FAM35DP-201ENST00000323387 2712 ntBASIC4.03□□□□□ -1.76
TRIM49D1C9J1S8 AC027287.1-201ENST00000553115 1453 ntBASIC4.03□□□□□ -1.76
TRIM49D1C9J1S8 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.03□□□□□ -1.76
TRIM49D1C9J1S8 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
TRIM49D1C9J1S8 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TRIM49D1C9J1S8 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.02□□□□□ -1.77
TRIM49D1C9J1S8 AL031985.3-201ENST00000565390 2449 ntBASIC4.02□□□□□ -1.77
TRIM49D1C9J1S8 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
TRIM49D1C9J1S8 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
TRIM49D1C9J1S8 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
TRIM49D1C9J1S8 RAC1P3-201ENST00000416129 580 ntBASIC4.02□□□□□ -1.77
TRIM49D1C9J1S8 COX6B1P7-201ENST00000430845 235 ntBASIC4.02□□□□□ -1.77
TRIM49D1C9J1S8 FHP1-201ENST00000442741 703 ntBASIC4.02□□□□□ -1.77
TRIM49D1C9J1S8 H2AFZP6-201ENST00000444403 394 ntBASIC4.02□□□□□ -1.77
TRIM49D1C9J1S8 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC4.02□□□□□ -1.77
TRIM49D1C9J1S8 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.02□□□□□ -1.77
TRIM49D1C9J1S8 RN7SL481P-201ENST00000477764 299 ntBASIC4.02□□□□□ -1.77
TRIM49D1C9J1S8 RN7SL205P-201ENST00000490174 284 ntBASIC4.02□□□□□ -1.77
TRIM49D1C9J1S8 RPL7P24-201ENST00000493052 752 ntBASIC4.02□□□□□ -1.77
TRIM49D1C9J1S8 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.02□□□□□ -1.77
TRIM49D1C9J1S8 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.02□□□□□ -1.77
TRIM49D1C9J1S8 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC4.02□□□□□ -1.77
TRIM49D1C9J1S8 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.02□□□□□ -1.77
TRIM49D1C9J1S8 AC099522.1-202ENST00000514718 367 ntBASIC4.02□□□□□ -1.77
TRIM49D1C9J1S8 IGLVIV-53-201ENST00000520107 367 ntBASIC4.02□□□□□ -1.77
TRIM49D1C9J1S8 OR5AN2P-201ENST00000534535 896 ntBASIC4.02□□□□□ -1.77
TRIM49D1C9J1S8 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.02□□□□□ -1.77
TRIM49D1C9J1S8 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.02□□□□□ -1.77
TRIM49D1C9J1S8 SNRPGP1-201ENST00000553864 222 ntBASIC4.02□□□□□ -1.77
TRIM49D1C9J1S8 AC234771.5-201ENST00000600161 514 ntBASIC4.02□□□□□ -1.77
TRIM49D1C9J1S8 MIR7151-201ENST00000617477 60 ntBASIC4.02□□□□□ -1.77
TRIM49D1C9J1S8 AL023881.1-201ENST00000621088 301 ntBASIC4.02□□□□□ -1.77
TRIM49D1C9J1S8 AP000346.3-201ENST00000622821 210 ntBASIC4.02□□□□□ -1.77
TRIM49D1C9J1S8 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
TRIM49D1C9J1S8 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TRIM49D1C9J1S8 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
TRIM49D1C9J1S8 MAPK10-373ENST00000641983 6772 ntBASIC4.02□□□□□ -1.77
TRIM49D1C9J1S8 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms