Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.36□□□□□ -1.71
SMIM28A0A1B0GU29 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
SMIM28A0A1B0GU29 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SMIM28A0A1B0GU29 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.36□□□□□ -1.71
SMIM28A0A1B0GU29 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.36□□□□□ -1.71
SMIM28A0A1B0GU29 AC067805.1-201ENST00000559344 470 ntBASIC4.36□□□□□ -1.71
SMIM28A0A1B0GU29 AC124068.1-201ENST00000563131 678 ntBASIC4.36□□□□□ -1.71
SMIM28A0A1B0GU29 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.36□□□□□ -1.71
SMIM28A0A1B0GU29 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.36□□□□□ -1.71
SMIM28A0A1B0GU29 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.36□□□□□ -1.71
SMIM28A0A1B0GU29 AL451044.1-201ENST00000604867 238 ntBASIC4.36□□□□□ -1.71
SMIM28A0A1B0GU29 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.36□□□□□ -1.71
SMIM28A0A1B0GU29 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC4.36□□□□□ -1.71
SMIM28A0A1B0GU29 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.36□□□□□ -1.71
SMIM28A0A1B0GU29 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.36□□□□□ -1.71
SMIM28A0A1B0GU29 DDX18P4-201ENST00000511690 1966 ntBASIC4.36□□□□□ -1.71
SMIM28A0A1B0GU29 AC022893.2-201ENST00000564832 3296 ntBASIC4.36□□□□□ -1.71
SMIM28A0A1B0GU29 PCAT14-202ENST00000627127 3935 ntBASIC4.35□□□□□ -1.71
SMIM28A0A1B0GU29 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SMIM28A0A1B0GU29 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SMIM28A0A1B0GU29 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SMIM28A0A1B0GU29 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.35□□□□□ -1.71
SMIM28A0A1B0GU29 RNU6-819P-201ENST00000364116 107 ntBASIC4.35□□□□□ -1.71
SMIM28A0A1B0GU29 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SMIM28A0A1B0GU29 AL139039.2-201ENST00000407436 479 ntBASIC4.35□□□□□ -1.71
SMIM28A0A1B0GU29 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC4.35□□□□□ -1.71
SMIM28A0A1B0GU29 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.35□□□□□ -1.71
SMIM28A0A1B0GU29 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.35□□□□□ -1.71
SMIM28A0A1B0GU29 RPS29P7-201ENST00000439662 171 ntBASIC4.35□□□□□ -1.71
SMIM28A0A1B0GU29 AL606490.8-201ENST00000441624 319 ntBASIC4.35□□□□□ -1.71
SMIM28A0A1B0GU29 HSPE1P22-201ENST00000456856 327 ntBASIC4.35□□□□□ -1.71
SMIM28A0A1B0GU29 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.35□□□□□ -1.71
SMIM28A0A1B0GU29 AC117525.1-201ENST00000515228 503 ntBASIC4.35□□□□□ -1.71
SMIM28A0A1B0GU29 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.35□□□□□ -1.71
SMIM28A0A1B0GU29 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SMIM28A0A1B0GU29 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.35□□□□□ -1.71
SMIM28A0A1B0GU29 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC4.35□□□□□ -1.71
SMIM28A0A1B0GU29 AC120057.2-201ENST00000571520 271 ntBASIC4.35□□□□□ -1.71
SMIM28A0A1B0GU29 FAM106CP-201ENST00000582212 507 ntBASIC4.35□□□□□ -1.71
SMIM28A0A1B0GU29 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.35□□□□□ -1.71
SMIM28A0A1B0GU29 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.35□□□□□ -1.71
SMIM28A0A1B0GU29 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.35□□□□□ -1.71
SMIM28A0A1B0GU29 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC4.35□□□□□ -1.71
SMIM28A0A1B0GU29 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SMIM28A0A1B0GU29 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.35□□□□□ -1.71
SMIM28A0A1B0GU29 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
SMIM28A0A1B0GU29 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SMIM28A0A1B0GU29 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
SMIM28A0A1B0GU29 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SMIM28A0A1B0GU29 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.34□□□□□ -1.71
SMIM28A0A1B0GU29 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
SMIM28A0A1B0GU29 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.71
SMIM28A0A1B0GU29 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
SMIM28A0A1B0GU29 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
SMIM28A0A1B0GU29 RN7SKP224-201ENST00000364140 325 ntBASIC4.34□□□□□ -1.71
SMIM28A0A1B0GU29 RNU6-213P-201ENST00000384051 104 ntBASIC4.34□□□□□ -1.71
SMIM28A0A1B0GU29 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.34□□□□□ -1.71
SMIM28A0A1B0GU29 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.34□□□□□ -1.71
SMIM28A0A1B0GU29 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
SMIM28A0A1B0GU29 RPL7P2-201ENST00000427639 268 ntBASIC4.34□□□□□ -1.71
SMIM28A0A1B0GU29 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.34□□□□□ -1.71
SMIM28A0A1B0GU29 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.34□□□□□ -1.71
SMIM28A0A1B0GU29 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.34□□□□□ -1.71
SMIM28A0A1B0GU29 AL591623.2-201ENST00000449978 222 ntBASIC4.34□□□□□ -1.71
SMIM28A0A1B0GU29 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.34□□□□□ -1.71
SMIM28A0A1B0GU29 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.34□□□□□ -1.71
SMIM28A0A1B0GU29 RPS26P28-201ENST00000470806 348 ntBASIC4.34□□□□□ -1.71
SMIM28A0A1B0GU29 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.34□□□□□ -1.71
SMIM28A0A1B0GU29 NPM1P41-201ENST00000512920 831 ntBASIC4.34□□□□□ -1.71
SMIM28A0A1B0GU29 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.34□□□□□ -1.71
SMIM28A0A1B0GU29 RNU6-362P-201ENST00000516736 90 ntBASIC4.34□□□□□ -1.71
SMIM28A0A1B0GU29 FTH1P11-201ENST00000517577 551 ntBASIC4.34□□□□□ -1.71
SMIM28A0A1B0GU29 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.34□□□□□ -1.71
SMIM28A0A1B0GU29 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.34□□□□□ -1.71
SMIM28A0A1B0GU29 AC091516.1-201ENST00000549191 703 ntBASIC4.34□□□□□ -1.71
SMIM28A0A1B0GU29 AC079171.1-201ENST00000568788 914 ntBASIC4.34□□□□□ -1.71
SMIM28A0A1B0GU29 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.34□□□□□ -1.71
SMIM28A0A1B0GU29 AC107308.1-201ENST00000615897 301 ntBASIC4.34□□□□□ -1.71
SMIM28A0A1B0GU29 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.34□□□□□ -1.71
SMIM28A0A1B0GU29 MIR7154-201ENST00000620673 73 ntBASIC4.34□□□□□ -1.71
SMIM28A0A1B0GU29 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
SMIM28A0A1B0GU29 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.34□□□□□ -1.71
SMIM28A0A1B0GU29 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SMIM28A0A1B0GU29 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SMIM28A0A1B0GU29 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
SMIM28A0A1B0GU29 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
SMIM28A0A1B0GU29 AC016588.2-201ENST00000632484 3021 ntBASIC4.34□□□□□ -1.72
SMIM28A0A1B0GU29 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SMIM28A0A1B0GU29 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.33□□□□□ -1.72
SMIM28A0A1B0GU29 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SMIM28A0A1B0GU29 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
SMIM28A0A1B0GU29 MARK2P15-201ENST00000432204 2186 ntBASIC4.33□□□□□ -1.72
SMIM28A0A1B0GU29 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SMIM28A0A1B0GU29 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.33□□□□□ -1.72
SMIM28A0A1B0GU29 AC233289.1-201ENST00000403700 508 ntBASIC4.33□□□□□ -1.72
SMIM28A0A1B0GU29 HMGB3P19-201ENST00000403971 560 ntBASIC4.33□□□□□ -1.72
SMIM28A0A1B0GU29 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.33□□□□□ -1.72
SMIM28A0A1B0GU29 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.33□□□□□ -1.72
SMIM28A0A1B0GU29 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.33□□□□□ -1.72
SMIM28A0A1B0GU29 AL356806.1-201ENST00000422524 916 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms