Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 OR10G5P-201ENST00000532733 358 ntBASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 NF1P5-201ENST00000588287 448 ntBASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 VN1R90P-201ENST00000595717 726 ntBASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 AL358072.1-201ENST00000604156 575 ntBASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 AP001005.3-201ENST00000622049 129 ntBASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 C4BPAP1-201ENST00000415474 1893 ntBASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 AC109780.1-201ENST00000451768 1344 ntBASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 AC107027.3-201ENST00000565095 3473 ntBASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 RNU6-216P-201ENST00000363282 104 ntBASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 RNA5SP234-201ENST00000363916 119 ntBASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 Y_RNA.201-201ENST00000364052 96 ntBASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 SNORA4.1-201ENST00000364263 144 ntBASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 RNU6-1122P-201ENST00000384449 107 ntBASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 AL136133.1-201ENST00000413694 376 ntBASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 RPS25P9-201ENST00000435591 252 ntBASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 ELOCP8-201ENST00000439309 332 ntBASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 MTND2P20-201ENST00000440805 661 ntBASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 ELOCP15-201ENST00000442090 332 ntBASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 AC023271.1-201ENST00000445936 1090 ntBASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 RPL23AP35-201ENST00000451906 501 ntBASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 RPL12P39-201ENST00000455456 496 ntBASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 RPS15AP1-201ENST00000457423 391 ntBASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 MTND4LP3-201ENST00000468320 276 ntBASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 AC092045.1-201ENST00000495716 1231 ntBASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 RPSAP51-201ENST00000497462 645 ntBASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 DSTNP2-201ENST00000504533 515 ntBASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 AC005178.1-201ENST00000508392 440 ntBASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 AC093281.2-201ENST00000510153 597 ntBASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 RNU6-759P-201ENST00000516740 103 ntBASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 MTCO1P49-201ENST00000523429 802 ntBASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 AC074029.1-201ENST00000552531 1044 ntBASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 MIR4660-201ENST00000583549 74 ntBASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 AC008687.2-201ENST00000597865 520 ntBASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 AL031985.2-201ENST00000600955 480 ntBASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 AL022161.1-201ENST00000604390 213 ntBASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 MIR7155-201ENST00000615925 56 ntBASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHGA3Q9Y5H0 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms