Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
NXF3Q9H4D5 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
NXF3Q9H4D5 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.45□□□□□ -1.7
NXF3Q9H4D5 RPL5P19-201ENST00000404228 893 ntBASIC4.45□□□□□ -1.7
NXF3Q9H4D5 RPS23P10-201ENST00000416185 486 ntBASIC4.45□□□□□ -1.7
NXF3Q9H4D5 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NXF3Q9H4D5 OR8F1P-201ENST00000425243 930 ntBASIC4.45□□□□□ -1.7
NXF3Q9H4D5 OR5BE1P-201ENST00000425977 939 ntBASIC4.45□□□□□ -1.7
NXF3Q9H4D5 MTCO1P51-201ENST00000427672 1060 ntBASIC4.45□□□□□ -1.7
NXF3Q9H4D5 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.45□□□□□ -1.7
NXF3Q9H4D5 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.45□□□□□ -1.7
NXF3Q9H4D5 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.45□□□□□ -1.7
NXF3Q9H4D5 RPS29P7-201ENST00000439662 171 ntBASIC4.45□□□□□ -1.7
NXF3Q9H4D5 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.45□□□□□ -1.7
NXF3Q9H4D5 AL359073.1-201ENST00000448036 403 ntBASIC4.45□□□□□ -1.7
NXF3Q9H4D5 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.45□□□□□ -1.7
NXF3Q9H4D5 AC022431.1-201ENST00000450941 438 ntBASIC4.45□□□□□ -1.7
NXF3Q9H4D5 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.45□□□□□ -1.7
NXF3Q9H4D5 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.45□□□□□ -1.7
NXF3Q9H4D5 RPL7P1-201ENST00000468161 747 ntBASIC4.45□□□□□ -1.7
NXF3Q9H4D5 RPL7P9-201ENST00000468715 747 ntBASIC4.45□□□□□ -1.7
NXF3Q9H4D5 UBA52P3-201ENST00000491303 382 ntBASIC4.45□□□□□ -1.7
NXF3Q9H4D5 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.45□□□□□ -1.7
NXF3Q9H4D5 AC008694.2-201ENST00000517591 306 ntBASIC4.45□□□□□ -1.7
NXF3Q9H4D5 AC063950.1-201ENST00000552036 308 ntBASIC4.45□□□□□ -1.7
NXF3Q9H4D5 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC4.45□□□□□ -1.7
NXF3Q9H4D5 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.45□□□□□ -1.7
NXF3Q9H4D5 AC114878.2-201ENST00000604863 1251 ntBASIC4.45□□□□□ -1.7
NXF3Q9H4D5 AC026979.4-201ENST00000606555 645 ntBASIC4.45□□□□□ -1.7
NXF3Q9H4D5 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
NXF3Q9H4D5 OR5BE1P-202ENST00000641168 1176 ntBASIC4.45□□□□□ -1.7
NXF3Q9H4D5 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
NXF3Q9H4D5 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
NXF3Q9H4D5 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
NXF3Q9H4D5 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NXF3Q9H4D5 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
NXF3Q9H4D5 ERCC6-202ENST00000374127 1782 ntBASIC4.45□□□□□ -1.7
NXF3Q9H4D5 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
NXF3Q9H4D5 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NXF3Q9H4D5 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NXF3Q9H4D5 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NXF3Q9H4D5 RNU6-697P-201ENST00000363348 107 ntBASIC4.44□□□□□ -1.7
NXF3Q9H4D5 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
NXF3Q9H4D5 AL445189.1-201ENST00000405722 338 ntBASIC4.44□□□□□ -1.7
NXF3Q9H4D5 HDGFP1-201ENST00000405943 252 ntBASIC4.44□□□□□ -1.7
NXF3Q9H4D5 VN1R8P-201ENST00000407739 893 ntBASIC4.44□□□□□ -1.7
NXF3Q9H4D5 RPL36AP36-201ENST00000418616 301 ntBASIC4.44□□□□□ -1.7
NXF3Q9H4D5 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.44□□□□□ -1.7
NXF3Q9H4D5 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.44□□□□□ -1.7
NXF3Q9H4D5 AL691449.1-201ENST00000426570 421 ntBASIC4.44□□□□□ -1.7
NXF3Q9H4D5 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.44□□□□□ -1.7
NXF3Q9H4D5 TBCAP1-201ENST00000436520 327 ntBASIC4.44□□□□□ -1.7
NXF3Q9H4D5 AL606490.8-201ENST00000441624 319 ntBASIC4.44□□□□□ -1.7
NXF3Q9H4D5 RPL36AP13-201ENST00000457490 317 ntBASIC4.44□□□□□ -1.7
NXF3Q9H4D5 AL133372.1-201ENST00000493565 745 ntBASIC4.44□□□□□ -1.7
NXF3Q9H4D5 AC010460.1-201ENST00000507087 466 ntBASIC4.44□□□□□ -1.7
NXF3Q9H4D5 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.44□□□□□ -1.7
NXF3Q9H4D5 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.44□□□□□ -1.7
NXF3Q9H4D5 snoU109.6-201ENST00000516831 118 ntBASIC4.44□□□□□ -1.7
NXF3Q9H4D5 IGLV3-26-201ENST00000520756 302 ntBASIC4.44□□□□□ -1.7
NXF3Q9H4D5 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC4.44□□□□□ -1.7
NXF3Q9H4D5 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NXF3Q9H4D5 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.44□□□□□ -1.7
NXF3Q9H4D5 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NXF3Q9H4D5 AC010615.3-201ENST00000597319 394 ntBASIC4.44□□□□□ -1.7
NXF3Q9H4D5 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.44□□□□□ -1.7
NXF3Q9H4D5 AC064801.1-201ENST00000612025 407 ntBASIC4.44□□□□□ -1.7
NXF3Q9H4D5 MIR6500-201ENST00000622700 86 ntBASIC4.44□□□□□ -1.7
NXF3Q9H4D5 CDRT1-208ENST00000630868 794 ntBASIC4.44□□□□□ -1.7
NXF3Q9H4D5 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
NXF3Q9H4D5 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
NXF3Q9H4D5 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NXF3Q9H4D5 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
NXF3Q9H4D5 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
NXF3Q9H4D5 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NXF3Q9H4D5 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NXF3Q9H4D5 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
NXF3Q9H4D5 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NXF3Q9H4D5 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.43□□□□□ -1.7
NXF3Q9H4D5 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NXF3Q9H4D5 AC105074.1-201ENST00000623380 3095 ntBASIC4.43□□□□□ -1.7
NXF3Q9H4D5 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NXF3Q9H4D5 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
NXF3Q9H4D5 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.43□□□□□ -1.7
NXF3Q9H4D5 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NXF3Q9H4D5 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NXF3Q9H4D5 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NXF3Q9H4D5 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NXF3Q9H4D5 NCSTNP1-201ENST00000406229 144 ntBASIC4.43□□□□□ -1.7
NXF3Q9H4D5 PDSS1P1-201ENST00000422953 1114 ntBASIC4.43□□□□□ -1.7
NXF3Q9H4D5 RPL7P2-201ENST00000427639 268 ntBASIC4.43□□□□□ -1.7
NXF3Q9H4D5 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.43□□□□□ -1.7
NXF3Q9H4D5 AL358472.1-201ENST00000431295 329 ntBASIC4.43□□□□□ -1.7
NXF3Q9H4D5 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.43□□□□□ -1.7
NXF3Q9H4D5 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NXF3Q9H4D5 AP000936.3-201ENST00000438127 255 ntBASIC4.43□□□□□ -1.7
NXF3Q9H4D5 RPL23AP89-201ENST00000439324 255 ntBASIC4.43□□□□□ -1.7
NXF3Q9H4D5 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.43□□□□□ -1.7
NXF3Q9H4D5 MTND6P32-201ENST00000457611 483 ntBASIC4.43□□□□□ -1.7
NXF3Q9H4D5 PSMC1P13-201ENST00000458195 985 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms