Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.89□□□□□ -1.63
SNX18Q96RF0 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC4.89□□□□□ -1.63
SNX18Q96RF0 AC090804.1-201ENST00000448870 490 ntBASIC4.89□□□□□ -1.63
SNX18Q96RF0 MTND1P27-201ENST00000451117 902 ntBASIC4.89□□□□□ -1.63
SNX18Q96RF0 TAF9P2-201ENST00000454958 515 ntBASIC4.89□□□□□ -1.63
SNX18Q96RF0 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.89□□□□□ -1.63
SNX18Q96RF0 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC4.89□□□□□ -1.63
SNX18Q96RF0 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC4.89□□□□□ -1.63
SNX18Q96RF0 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC4.89□□□□□ -1.63
SNX18Q96RF0 RN7SL466P-201ENST00000497546 295 ntBASIC4.89□□□□□ -1.63
SNX18Q96RF0 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SNX18Q96RF0 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SNX18Q96RF0 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.89□□□□□ -1.63
SNX18Q96RF0 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC4.89□□□□□ -1.63
SNX18Q96RF0 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SNX18Q96RF0 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.89□□□□□ -1.63
SNX18Q96RF0 EIF3KP3-201ENST00000514461 639 ntBASIC4.89□□□□□ -1.63
SNX18Q96RF0 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SNX18Q96RF0 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.89□□□□□ -1.63
SNX18Q96RF0 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
SNX18Q96RF0 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.89□□□□□ -1.63
SNX18Q96RF0 AC022360.1-201ENST00000521058 340 ntBASIC4.89□□□□□ -1.63
SNX18Q96RF0 AC092709.1-201ENST00000521355 1045 ntBASIC4.89□□□□□ -1.63
SNX18Q96RF0 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.89□□□□□ -1.63
SNX18Q96RF0 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC4.89□□□□□ -1.63
SNX18Q96RF0 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SNX18Q96RF0 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.89□□□□□ -1.63
SNX18Q96RF0 UBE2NP1-201ENST00000545592 458 ntBASIC4.89□□□□□ -1.63
SNX18Q96RF0 AKIRIN1P1-201ENST00000547384 544 ntBASIC4.89□□□□□ -1.63
SNX18Q96RF0 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SNX18Q96RF0 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.89□□□□□ -1.63
SNX18Q96RF0 ACTR3BP3-201ENST00000565577 979 ntBASIC4.89□□□□□ -1.63
SNX18Q96RF0 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC4.89□□□□□ -1.63
SNX18Q96RF0 AL031985.2-201ENST00000600955 480 ntBASIC4.89□□□□□ -1.63
SNX18Q96RF0 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.89□□□□□ -1.63
SNX18Q96RF0 AC068790.6-201ENST00000602558 258 ntBASIC4.89□□□□□ -1.63
SNX18Q96RF0 AC011453.2-201ENST00000603737 729 ntBASIC4.89□□□□□ -1.63
SNX18Q96RF0 FO393422.1-201ENST00000603908 708 ntBASIC4.89□□□□□ -1.63
SNX18Q96RF0 AC069545.1-201ENST00000605671 358 ntBASIC4.89□□□□□ -1.63
SNX18Q96RF0 AC103591.3-201ENST00000608684 209 ntBASIC4.89□□□□□ -1.63
SNX18Q96RF0 AC004223.4-201ENST00000612426 332 ntBASIC4.89□□□□□ -1.63
SNX18Q96RF0 AC109583.2-201ENST00000617367 129 ntBASIC4.89□□□□□ -1.63
SNX18Q96RF0 AC005840.5-201ENST00000619166 599 ntBASIC4.89□□□□□ -1.63
SNX18Q96RF0 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.89□□□□□ -1.63
SNX18Q96RF0 FP325313.1-201ENST00000638228 703 ntBASIC4.89□□□□□ -1.63
SNX18Q96RF0 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.89□□□□□ -1.63
SNX18Q96RF0 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
SNX18Q96RF0 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.89□□□□□ -1.63
SNX18Q96RF0 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
SNX18Q96RF0 AL360270.2-201ENST00000562952 5985 ntBASIC4.89□□□□□ -1.63
SNX18Q96RF0 ANKRD20A17P-201ENST00000511745 1330 ntBASIC4.89□□□□□ -1.63
SNX18Q96RF0 AC087359.1-201ENST00000508335 1740 ntBASIC4.89□□□□□ -1.63
SNX18Q96RF0 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
SNX18Q96RF0 AL390237.1-201ENST00000404226 1415 ntBASIC4.89□□□□□ -1.63
SNX18Q96RF0 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SNX18Q96RF0 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
SNX18Q96RF0 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.88□□□□□ -1.63
SNX18Q96RF0 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SNX18Q96RF0 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SNX18Q96RF0 MRE11P1-201ENST00000464884 2127 ntBASIC4.88□□□□□ -1.63
SNX18Q96RF0 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
SNX18Q96RF0 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SNX18Q96RF0 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SNX18Q96RF0 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.88□□□□□ -1.63
SNX18Q96RF0 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
SNX18Q96RF0 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.88□□□□□ -1.63
SNX18Q96RF0 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SNX18Q96RF0 Z95327.2-201ENST00000414579 1873 ntBASIC4.88□□□□□ -1.63
SNX18Q96RF0 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
SNX18Q96RF0 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.88□□□□□ -1.63
SNX18Q96RF0 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
SNX18Q96RF0 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.88□□□□□ -1.63
SNX18Q96RF0 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
SNX18Q96RF0 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.88□□□□□ -1.63
SNX18Q96RF0 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SNX18Q96RF0 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SNX18Q96RF0 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
SNX18Q96RF0 RNU6-1200P-201ENST00000384162 107 ntBASIC4.88□□□□□ -1.63
SNX18Q96RF0 DBIP1-201ENST00000401435 260 ntBASIC4.88□□□□□ -1.63
SNX18Q96RF0 AL590290.1-201ENST00000405336 380 ntBASIC4.88□□□□□ -1.63
SNX18Q96RF0 RNU6-648P-201ENST00000410190 107 ntBASIC4.88□□□□□ -1.63
SNX18Q96RF0 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.88□□□□□ -1.63
SNX18Q96RF0 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC4.88□□□□□ -1.63
SNX18Q96RF0 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC4.88□□□□□ -1.63
SNX18Q96RF0 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SNX18Q96RF0 OR2AH1P-201ENST00000425717 928 ntBASIC4.88□□□□□ -1.63
SNX18Q96RF0 AL662874.1-201ENST00000426065 230 ntBASIC4.88□□□□□ -1.63
SNX18Q96RF0 IFNNP1-201ENST00000429219 553 ntBASIC4.88□□□□□ -1.63
SNX18Q96RF0 USP9YP31-201ENST00000431405 881 ntBASIC4.88□□□□□ -1.63
SNX18Q96RF0 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.88□□□□□ -1.63
SNX18Q96RF0 RPL21P110-201ENST00000433345 446 ntBASIC4.88□□□□□ -1.63
SNX18Q96RF0 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.88□□□□□ -1.63
SNX18Q96RF0 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.88□□□□□ -1.63
SNX18Q96RF0 USP9YP22-201ENST00000438971 294 ntBASIC4.88□□□□□ -1.63
SNX18Q96RF0 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC4.88□□□□□ -1.63
SNX18Q96RF0 UBE2V1P5-201ENST00000440070 405 ntBASIC4.88□□□□□ -1.63
SNX18Q96RF0 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.88□□□□□ -1.63
SNX18Q96RF0 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.88□□□□□ -1.63
SNX18Q96RF0 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.88□□□□□ -1.63
SNX18Q96RF0 CYCSP24-201ENST00000445119 316 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms