Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 AP000563.1-201ENST00000490865 758 ntBASIC5.16□□□□□ -1.58
KRT78Q8N1N4 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC5.16□□□□□ -1.58
KRT78Q8N1N4 AC104109.1-201ENST00000498563 436 ntBASIC5.16□□□□□ -1.58
KRT78Q8N1N4 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC5.16□□□□□ -1.58
KRT78Q8N1N4 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.16□□□□□ -1.58
KRT78Q8N1N4 SNORA48.10-201ENST00000516965 160 ntBASIC5.16□□□□□ -1.58
KRT78Q8N1N4 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.16□□□□□ -1.58
KRT78Q8N1N4 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC5.16□□□□□ -1.58
KRT78Q8N1N4 ARL2BPP5-201ENST00000523141 481 ntBASIC5.16□□□□□ -1.58
KRT78Q8N1N4 MTCO1P47-201ENST00000523889 1271 ntBASIC5.16□□□□□ -1.58
KRT78Q8N1N4 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC5.16□□□□□ -1.58
KRT78Q8N1N4 EMP1-206ENST00000537612 505 ntTSL 3 BASIC5.16□□□□□ -1.58
KRT78Q8N1N4 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.16□□□□□ -1.58
KRT78Q8N1N4 AC068993.1-201ENST00000546724 589 ntBASIC5.16□□□□□ -1.58
KRT78Q8N1N4 AL359219.2-201ENST00000555184 348 ntBASIC5.16□□□□□ -1.58
KRT78Q8N1N4 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.16□□□□□ -1.58
KRT78Q8N1N4 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.16□□□□□ -1.58
KRT78Q8N1N4 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC5.16□□□□□ -1.58
KRT78Q8N1N4 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.16□□□□□ -1.58
KRT78Q8N1N4 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC5.16□□□□□ -1.58
KRT78Q8N1N4 MIR4310-201ENST00000582950 57 ntBASIC5.16□□□□□ -1.58
KRT78Q8N1N4 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
KRT78Q8N1N4 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC5.16□□□□□ -1.58
KRT78Q8N1N4 BNIP3P24-201ENST00000593398 557 ntBASIC5.16□□□□□ -1.58
KRT78Q8N1N4 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
KRT78Q8N1N4 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
KRT78Q8N1N4 AC012557.2-201ENST00000605919 418 ntBASIC5.16□□□□□ -1.58
KRT78Q8N1N4 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC5.16□□□□□ -1.58
KRT78Q8N1N4 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC5.16□□□□□ -1.58
KRT78Q8N1N4 AL139407.1-201ENST00000613826 1175 ntBASIC5.16□□□□□ -1.58
KRT78Q8N1N4 AC073348.1-201ENST00000623002 331 ntBASIC5.16□□□□□ -1.58
KRT78Q8N1N4 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC5.16□□□□□ -1.58
KRT78Q8N1N4 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
KRT78Q8N1N4 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.16□□□□□ -1.58
KRT78Q8N1N4 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.16□□□□□ -1.58
KRT78Q8N1N4 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
KRT78Q8N1N4 DDX18P5-201ENST00000534547 1306 ntBASIC5.16□□□□□ -1.58
KRT78Q8N1N4 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
KRT78Q8N1N4 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.16□□□□□ -1.58
KRT78Q8N1N4 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
KRT78Q8N1N4 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
KRT78Q8N1N4 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
KRT78Q8N1N4 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
KRT78Q8N1N4 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.16□□□□□ -1.58
KRT78Q8N1N4 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.15□□□□□ -1.58
KRT78Q8N1N4 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
KRT78Q8N1N4 CDR1-202ENST00000625883 1485 ntBASIC5.15□□□□□ -1.58
KRT78Q8N1N4 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.58
KRT78Q8N1N4 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
KRT78Q8N1N4 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
KRT78Q8N1N4 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
KRT78Q8N1N4 MIR133B-201ENST00000362210 119 ntBASIC5.15□□□□□ -1.59
KRT78Q8N1N4 RNA5SP335-201ENST00000363817 110 ntBASIC5.15□□□□□ -1.59
KRT78Q8N1N4 Y_RNA.311-201ENST00000365068 96 ntBASIC5.15□□□□□ -1.59
KRT78Q8N1N4 SNORA68.2-201ENST00000391263 128 ntBASIC5.15□□□□□ -1.59
KRT78Q8N1N4 VDAC2P1-201ENST00000399358 958 ntBASIC5.15□□□□□ -1.59
KRT78Q8N1N4 AL513325.1-201ENST00000417716 1034 ntBASIC5.15□□□□□ -1.59
KRT78Q8N1N4 AC092634.6-201ENST00000418558 192 ntBASIC5.15□□□□□ -1.59
KRT78Q8N1N4 AC124944.2-201ENST00000429866 1242 ntBASIC5.15□□□□□ -1.59
KRT78Q8N1N4 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.15□□□□□ -1.59
KRT78Q8N1N4 AL354941.1-201ENST00000438600 464 ntBASIC5.15□□□□□ -1.59
KRT78Q8N1N4 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.15□□□□□ -1.59
KRT78Q8N1N4 Z83846.1-201ENST00000446798 265 ntBASIC5.15□□□□□ -1.59
KRT78Q8N1N4 AC108463.1-201ENST00000450258 347 ntBASIC5.15□□□□□ -1.59
KRT78Q8N1N4 RPL12P26-201ENST00000452430 487 ntBASIC5.15□□□□□ -1.59
KRT78Q8N1N4 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC5.15□□□□□ -1.59
KRT78Q8N1N4 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
KRT78Q8N1N4 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.15□□□□□ -1.59
KRT78Q8N1N4 AL136038.1-201ENST00000497246 351 ntBASIC5.15□□□□□ -1.59
KRT78Q8N1N4 RPSAP51-201ENST00000497462 645 ntBASIC5.15□□□□□ -1.59
KRT78Q8N1N4 AC010486.2-201ENST00000505572 483 ntBASIC5.15□□□□□ -1.59
KRT78Q8N1N4 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.15□□□□□ -1.59
KRT78Q8N1N4 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.15□□□□□ -1.59
KRT78Q8N1N4 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.15□□□□□ -1.59
KRT78Q8N1N4 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC5.15□□□□□ -1.59
KRT78Q8N1N4 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.15□□□□□ -1.59
KRT78Q8N1N4 OSBPL9P5-201ENST00000542581 171 ntBASIC5.15□□□□□ -1.59
KRT78Q8N1N4 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC5.15□□□□□ -1.59
KRT78Q8N1N4 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.15□□□□□ -1.59
KRT78Q8N1N4 DUXAP6-201ENST00000553858 601 ntBASIC5.15□□□□□ -1.59
KRT78Q8N1N4 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.15□□□□□ -1.59
KRT78Q8N1N4 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC5.15□□□□□ -1.59
KRT78Q8N1N4 RN7SL290P-201ENST00000578661 300 ntBASIC5.15□□□□□ -1.59
KRT78Q8N1N4 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC5.15□□□□□ -1.59
KRT78Q8N1N4 AC013444.2-201ENST00000603317 787 ntBASIC5.15□□□□□ -1.59
KRT78Q8N1N4 SUGT1P3-202ENST00000604259 383 ntBASIC5.15□□□□□ -1.59
KRT78Q8N1N4 AL021707.7-201ENST00000607991 416 ntBASIC5.15□□□□□ -1.59
KRT78Q8N1N4 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC5.15□□□□□ -1.59
KRT78Q8N1N4 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.15□□□□□ -1.59
KRT78Q8N1N4 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.15□□□□□ -1.59
KRT78Q8N1N4 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.59
KRT78Q8N1N4 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.15□□□□□ -1.59
KRT78Q8N1N4 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
KRT78Q8N1N4 AC002525.1-201ENST00000624392 1622 ntBASIC5.15□□□□□ -1.59
KRT78Q8N1N4 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.59
KRT78Q8N1N4 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
KRT78Q8N1N4 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
KRT78Q8N1N4 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
KRT78Q8N1N4 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
KRT78Q8N1N4 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms