Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RFC3P40938 AC005261.4-201ENST00000600047 1385 ntBASIC4.01□□□□□ -1.77
RFC3P40938 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
RFC3P40938 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
RFC3P40938 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RFC3P40938 AC240504.1-201ENST00000395709 845 ntBASIC4□□□□□ -1.77
RFC3P40938 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4□□□□□ -1.77
RFC3P40938 VDAC1P9-201ENST00000412766 841 ntBASIC4□□□□□ -1.77
RFC3P40938 TRAPPC2P10-201ENST00000415662 323 ntBASIC4□□□□□ -1.77
RFC3P40938 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4□□□□□ -1.77
RFC3P40938 RPL17P36-201ENST00000420302 549 ntBASIC4□□□□□ -1.77
RFC3P40938 Z74021.1-201ENST00000423610 407 ntBASIC4□□□□□ -1.77
RFC3P40938 RPL23AP38-201ENST00000423801 469 ntBASIC4□□□□□ -1.77
RFC3P40938 AJ239321.1-201ENST00000424255 564 ntBASIC4□□□□□ -1.77
RFC3P40938 AL158073.1-201ENST00000426848 1104 ntBASIC4□□□□□ -1.77
RFC3P40938 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4□□□□□ -1.77
RFC3P40938 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4□□□□□ -1.77
RFC3P40938 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4□□□□□ -1.77
RFC3P40938 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC4□□□□□ -1.77
RFC3P40938 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4□□□□□ -1.77
RFC3P40938 METTL15P1-201ENST00000481421 1045 ntBASIC4□□□□□ -1.77
RFC3P40938 AC108475.1-201ENST00000507880 950 ntBASIC4□□□□□ -1.77
RFC3P40938 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4□□□□□ -1.77
RFC3P40938 AC108471.1-201ENST00000513977 287 ntBASIC4□□□□□ -1.77
RFC3P40938 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4□□□□□ -1.77
RFC3P40938 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4□□□□□ -1.77
RFC3P40938 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4□□□□□ -1.77
RFC3P40938 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4□□□□□ -1.77
RFC3P40938 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4□□□□□ -1.77
RFC3P40938 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4□□□□□ -1.77
RFC3P40938 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4□□□□□ -1.77
RFC3P40938 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4□□□□□ -1.77
RFC3P40938 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4□□□□□ -1.77
RFC3P40938 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4□□□□□ -1.77
RFC3P40938 AL139286.1-201ENST00000604465 483 ntBASIC4□□□□□ -1.77
RFC3P40938 AL160290.3-201ENST00000604869 165 ntBASIC4□□□□□ -1.77
RFC3P40938 AC008966.2-201ENST00000606157 453 ntBASIC4□□□□□ -1.77
RFC3P40938 AC010857.1-201ENST00000606398 594 ntBASIC4□□□□□ -1.77
RFC3P40938 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
RFC3P40938 uc_338.13-201ENST00000618243 179 ntBASIC4□□□□□ -1.77
RFC3P40938 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4□□□□□ -1.77
RFC3P40938 MIR4727-201ENST00000622232 55 ntBASIC4□□□□□ -1.77
RFC3P40938 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4□□□□□ -1.77
RFC3P40938 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4□□□□□ -1.77
RFC3P40938 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
RFC3P40938 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4□□□□□ -1.77
RFC3P40938 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
RFC3P40938 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC3.99□□□□□ -1.77
RFC3P40938 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.99□□□□□ -1.77
RFC3P40938 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
RFC3P40938 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RFC3P40938 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RFC3P40938 MIR383-201ENST00000362257 73 ntBASIC3.99□□□□□ -1.77
RFC3P40938 RNU6-891P-201ENST00000384280 111 ntBASIC3.99□□□□□ -1.77
RFC3P40938 SNORA70C-201ENST00000384538 135 ntBASIC3.99□□□□□ -1.77
RFC3P40938 AMZ2P2-201ENST00000406819 1057 ntBASIC3.99□□□□□ -1.77
RFC3P40938 RN7SKP222-201ENST00000410651 315 ntBASIC3.99□□□□□ -1.77
RFC3P40938 RNU6-603P-201ENST00000411403 107 ntBASIC3.99□□□□□ -1.77
RFC3P40938 MFSD13B-201ENST00000420133 1290 ntBASIC3.99□□□□□ -1.77
RFC3P40938 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.99□□□□□ -1.77
RFC3P40938 AL391219.1-201ENST00000422570 483 ntBASIC3.99□□□□□ -1.77
RFC3P40938 RPS27AP12-201ENST00000429552 465 ntBASIC3.99□□□□□ -1.77
RFC3P40938 RPL12P46-201ENST00000436610 195 ntBASIC3.99□□□□□ -1.77
RFC3P40938 AC092013.1-201ENST00000438795 332 ntBASIC3.99□□□□□ -1.77
RFC3P40938 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RFC3P40938 RPL7P33-201ENST00000444159 742 ntBASIC3.99□□□□□ -1.77
RFC3P40938 VN1R48P-201ENST00000448149 1036 ntBASIC3.99□□□□□ -1.77
RFC3P40938 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.99□□□□□ -1.77
RFC3P40938 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.99□□□□□ -1.77
RFC3P40938 AC091167.1-201ENST00000492017 396 ntBASIC3.99□□□□□ -1.77
RFC3P40938 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC3.99□□□□□ -1.77
RFC3P40938 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC3.99□□□□□ -1.77
RFC3P40938 ATP1B1P1-201ENST00000509767 915 ntBASIC3.99□□□□□ -1.77
RFC3P40938 PPBPP1-201ENST00000510807 373 ntBASIC3.99□□□□□ -1.77
RFC3P40938 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.99□□□□□ -1.77
RFC3P40938 RN7SKP21-201ENST00000516503 220 ntBASIC3.99□□□□□ -1.77
RFC3P40938 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.99□□□□□ -1.77
RFC3P40938 IGHVIII-38-1-201ENST00000521454 282 ntBASIC3.99□□□□□ -1.77
RFC3P40938 AC090819.1-201ENST00000523800 1111 ntBASIC3.99□□□□□ -1.77
RFC3P40938 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.99□□□□□ -1.77
RFC3P40938 OR5BC1P-201ENST00000529327 739 ntBASIC3.99□□□□□ -1.77
RFC3P40938 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RFC3P40938 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.99□□□□□ -1.77
RFC3P40938 MEG8-217ENST00000556637 924 ntTSL 5 BASIC3.99□□□□□ -1.77
RFC3P40938 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.99□□□□□ -1.77
RFC3P40938 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC3.99□□□□□ -1.77
RFC3P40938 AC023762.1-201ENST00000603280 584 ntBASIC3.99□□□□□ -1.77
RFC3P40938 AC067959.1-201ENST00000604334 379 ntBASIC3.99□□□□□ -1.77
RFC3P40938 AL354984.3-201ENST00000604803 325 ntBASIC3.99□□□□□ -1.77
RFC3P40938 MIR6891-201ENST00000618788 93 ntBASIC3.99□□□□□ -1.77
RFC3P40938 RPL23AP61-201ENST00000623642 466 ntBASIC3.99□□□□□ -1.77
RFC3P40938 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.99□□□□□ -1.77
RFC3P40938 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.99□□□□□ -1.77
RFC3P40938 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RFC3P40938 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RFC3P40938 EIF2AP4-201ENST00000424793 1781 ntBASIC3.99□□□□□ -1.77
RFC3P40938 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RFC3P40938 USP9YP4-201ENST00000424401 1745 ntBASIC3.98□□□□□ -1.77
RFC3P40938 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.98□□□□□ -1.77
RFC3P40938 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms