Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AC069209.1-201ENST00000619282 651 ntBASIC5.92□□□□□ -1.46
COL4A3BPQ9Y5P4 RNU6-156P-201ENST00000621869 107 ntBASIC5.92□□□□□ -1.46
COL4A3BPQ9Y5P4 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.92□□□□□ -1.46
COL4A3BPQ9Y5P4 MIR4278-201ENST00000636094 69 ntBASIC5.92□□□□□ -1.46
COL4A3BPQ9Y5P4 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.92□□□□□ -1.46
COL4A3BPQ9Y5P4 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL4A3BPQ9Y5P4 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL4A3BPQ9Y5P4 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
COL4A3BPQ9Y5P4 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL4A3BPQ9Y5P4 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
COL4A3BPQ9Y5P4 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
COL4A3BPQ9Y5P4 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
COL4A3BPQ9Y5P4 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL4A3BPQ9Y5P4 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.91□□□□□ -1.46
COL4A3BPQ9Y5P4 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL4A3BPQ9Y5P4 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
COL4A3BPQ9Y5P4 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
COL4A3BPQ9Y5P4 AC005539.1-201ENST00000443768 1479 ntBASIC5.91□□□□□ -1.46
COL4A3BPQ9Y5P4 MAPK10-304ENST00000641341 3984 ntBASIC5.91□□□□□ -1.46
COL4A3BPQ9Y5P4 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL4A3BPQ9Y5P4 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL4A3BPQ9Y5P4 RNU1-43P-201ENST00000365052 165 ntBASIC5.91□□□□□ -1.46
COL4A3BPQ9Y5P4 AL078604.1-201ENST00000404609 466 ntBASIC5.91□□□□□ -1.46
COL4A3BPQ9Y5P4 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
COL4A3BPQ9Y5P4 AC092634.6-201ENST00000418558 192 ntBASIC5.91□□□□□ -1.46
COL4A3BPQ9Y5P4 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC5.91□□□□□ -1.46
COL4A3BPQ9Y5P4 VTI1BP4-201ENST00000427516 527 ntBASIC5.91□□□□□ -1.46
COL4A3BPQ9Y5P4 HSPD1P12-201ENST00000429127 1069 ntBASIC5.91□□□□□ -1.46
COL4A3BPQ9Y5P4 UBE2V1P1-201ENST00000430836 445 ntBASIC5.91□□□□□ -1.46
COL4A3BPQ9Y5P4 ATP5F1P1-201ENST00000433775 569 ntBASIC5.91□□□□□ -1.46
COL4A3BPQ9Y5P4 RPL19P16-201ENST00000433839 588 ntBASIC5.91□□□□□ -1.46
COL4A3BPQ9Y5P4 Z77249.1-201ENST00000444622 1175 ntBASIC5.91□□□□□ -1.46
COL4A3BPQ9Y5P4 APOOP2-201ENST00000461561 539 ntBASIC5.91□□□□□ -1.46
COL4A3BPQ9Y5P4 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
COL4A3BPQ9Y5P4 AP000893.1-201ENST00000474462 794 ntBASIC5.91□□□□□ -1.46
COL4A3BPQ9Y5P4 OR5M14P-201ENST00000506803 618 ntBASIC5.91□□□□□ -1.46
COL4A3BPQ9Y5P4 AC079395.1-201ENST00000510981 262 ntBASIC5.91□□□□□ -1.46
COL4A3BPQ9Y5P4 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC5.91□□□□□ -1.46
COL4A3BPQ9Y5P4 RNA5SP373-201ENST00000517271 95 ntBASIC5.91□□□□□ -1.46
COL4A3BPQ9Y5P4 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.91□□□□□ -1.46
COL4A3BPQ9Y5P4 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC5.91□□□□□ -1.46
COL4A3BPQ9Y5P4 MRPS36P5-201ENST00000551909 298 ntBASIC5.91□□□□□ -1.46
COL4A3BPQ9Y5P4 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC5.91□□□□□ -1.46
COL4A3BPQ9Y5P4 AC068446.3-201ENST00000555285 382 ntBASIC5.91□□□□□ -1.46
COL4A3BPQ9Y5P4 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC5.91□□□□□ -1.46
COL4A3BPQ9Y5P4 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.91□□□□□ -1.46
COL4A3BPQ9Y5P4 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.91□□□□□ -1.46
COL4A3BPQ9Y5P4 AC009094.1-201ENST00000564443 426 ntBASIC5.91□□□□□ -1.46
COL4A3BPQ9Y5P4 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC5.91□□□□□ -1.46
COL4A3BPQ9Y5P4 AC145350.1-201ENST00000567426 208 ntBASIC5.91□□□□□ -1.46
COL4A3BPQ9Y5P4 OR4K7P-201ENST00000580232 945 ntBASIC5.91□□□□□ -1.46
COL4A3BPQ9Y5P4 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC5.91□□□□□ -1.46
COL4A3BPQ9Y5P4 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC5.91□□□□□ -1.46
COL4A3BPQ9Y5P4 AC080013.3-201ENST00000606839 578 ntBASIC5.91□□□□□ -1.46
COL4A3BPQ9Y5P4 BX323046.1-201ENST00000610145 535 ntBASIC5.91□□□□□ -1.46
COL4A3BPQ9Y5P4 AL139407.1-201ENST00000613826 1175 ntBASIC5.91□□□□□ -1.46
COL4A3BPQ9Y5P4 AC090527.3-201ENST00000619041 548 ntBASIC5.91□□□□□ -1.46
COL4A3BPQ9Y5P4 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.91□□□□□ -1.46
COL4A3BPQ9Y5P4 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
COL4A3BPQ9Y5P4 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL4A3BPQ9Y5P4 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL4A3BPQ9Y5P4 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL4A3BPQ9Y5P4 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
COL4A3BPQ9Y5P4 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
COL4A3BPQ9Y5P4 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.9□□□□□ -1.46
COL4A3BPQ9Y5P4 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
COL4A3BPQ9Y5P4 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
COL4A3BPQ9Y5P4 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
COL4A3BPQ9Y5P4 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
COL4A3BPQ9Y5P4 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
COL4A3BPQ9Y5P4 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.9□□□□□ -1.46
COL4A3BPQ9Y5P4 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
COL4A3BPQ9Y5P4 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
COL4A3BPQ9Y5P4 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
COL4A3BPQ9Y5P4 RN7SKP153-201ENST00000365026 316 ntBASIC5.9□□□□□ -1.46
COL4A3BPQ9Y5P4 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
COL4A3BPQ9Y5P4 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
COL4A3BPQ9Y5P4 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
COL4A3BPQ9Y5P4 AL049545.1-201ENST00000401856 572 ntBASIC5.9□□□□□ -1.46
COL4A3BPQ9Y5P4 DUTP5-201ENST00000406790 469 ntBASIC5.9□□□□□ -1.46
COL4A3BPQ9Y5P4 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.9□□□□□ -1.46
COL4A3BPQ9Y5P4 NUP35P2-201ENST00000416748 943 ntBASIC5.9□□□□□ -1.46
COL4A3BPQ9Y5P4 VPS26BP1-201ENST00000417155 755 ntBASIC5.9□□□□□ -1.46
COL4A3BPQ9Y5P4 GNG5P5-201ENST00000420444 220 ntBASIC5.9□□□□□ -1.46
COL4A3BPQ9Y5P4 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC5.9□□□□□ -1.46
COL4A3BPQ9Y5P4 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
COL4A3BPQ9Y5P4 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.9□□□□□ -1.46
COL4A3BPQ9Y5P4 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.9□□□□□ -1.46
COL4A3BPQ9Y5P4 AC005033.1-201ENST00000428904 813 ntBASIC5.9□□□□□ -1.46
COL4A3BPQ9Y5P4 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.9□□□□□ -1.46
COL4A3BPQ9Y5P4 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC5.9□□□□□ -1.46
COL4A3BPQ9Y5P4 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.9□□□□□ -1.46
COL4A3BPQ9Y5P4 HMGB3P21-201ENST00000452483 547 ntBASIC5.9□□□□□ -1.46
COL4A3BPQ9Y5P4 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC5.9□□□□□ -1.46
COL4A3BPQ9Y5P4 RPL15P21-201ENST00000495592 567 ntBASIC5.9□□□□□ -1.46
COL4A3BPQ9Y5P4 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
COL4A3BPQ9Y5P4 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC5.9□□□□□ -1.46
COL4A3BPQ9Y5P4 SNORA48.10-201ENST00000516965 160 ntBASIC5.9□□□□□ -1.46
COL4A3BPQ9Y5P4 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC5.9□□□□□ -1.46
COL4A3BPQ9Y5P4 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms