Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC6.71□□□□□ -1.34
CUEDC1Q9NWM3 AC008782.1-201ENST00000603386 430 ntBASIC6.71□□□□□ -1.34
CUEDC1Q9NWM3 AL133173.2-201ENST00000614270 90 ntBASIC6.71□□□□□ -1.34
CUEDC1Q9NWM3 AC004696.1-201ENST00000614345 607 ntBASIC6.71□□□□□ -1.34
CUEDC1Q9NWM3 AP005212.3-201ENST00000619964 528 ntBASIC6.71□□□□□ -1.34
CUEDC1Q9NWM3 SRP54-214ENST00000630962 162 ntTSL 5 BASIC6.71□□□□□ -1.34
CUEDC1Q9NWM3 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CUEDC1Q9NWM3 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC6.71□□□□□ -1.34
CUEDC1Q9NWM3 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CUEDC1Q9NWM3 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CUEDC1Q9NWM3 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CUEDC1Q9NWM3 OR4G1P-203ENST00000641984 1631 ntBASIC6.71□□□□□ -1.34
CUEDC1Q9NWM3 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CUEDC1Q9NWM3 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CUEDC1Q9NWM3 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.71□□□□□ -1.34
CUEDC1Q9NWM3 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC6.71□□□□□ -1.34
CUEDC1Q9NWM3 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CUEDC1Q9NWM3 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 MTND5P27-201ENST00000428871 1720 ntBASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 PWAR1-201ENST00000624188 2414 ntBASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 RNU6-249P-201ENST00000363016 102 ntBASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 RN7SKP269-201ENST00000365545 319 ntBASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 NFIB-202ENST00000380924 840 ntTSL 5 BASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 RNU6-456P-201ENST00000384493 107 ntBASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 MIR199B-201ENST00000384849 110 ntBASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 AL359715.1-201ENST00000404330 555 ntBASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 MAST4-207ENST00000407621 559 ntTSL 2 BASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 RN7SKP266-201ENST00000410232 287 ntBASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 RN7SKP268-201ENST00000411107 316 ntBASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 TRAPPC2P5-201ENST00000426293 308 ntBASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 RPL32P28-201ENST00000443577 397 ntBASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 MTCO1P27-201ENST00000448269 226 ntBASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 AC007547.1-201ENST00000462177 490 ntBASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 RPL29P23-201ENST00000486188 442 ntBASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 HMGB1P30-201ENST00000492455 606 ntBASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 AC025164.1-201ENST00000496249 478 ntBASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 AC114324.2-202ENST00000503812 134 ntBASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 AC096754.1-201ENST00000508904 818 ntBASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 DCAF13P2-201ENST00000514188 555 ntBASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 AC093303.1-201ENST00000514549 295 ntBASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 OR52H2P-201ENST00000514607 902 ntBASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 PSMA2P1-201ENST00000526365 646 ntBASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 OR5BK1P-201ENST00000550421 823 ntBASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 AC005357.1-201ENST00000588399 301 ntBASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 AC115085.1-201ENST00000588924 229 ntBASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 AC011447.2-201ENST00000592921 283 ntBASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 PSMA6P4-201ENST00000603247 718 ntBASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 AC244517.12-201ENST00000623581 663 ntBASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 AC079597.1-201ENST00000624306 508 ntBASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 AC129502.1-201ENST00000623261 1654 ntBASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 AP005432.1-201ENST00000580891 3485 ntBASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
CUEDC1Q9NWM3 AC104837.1-201ENST00000444644 1587 ntBASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 AC092079.1-201ENST00000558620 1985 ntBASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 196.6 ms