Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 AC008751.2-201ENST00000597885 980 ntBASIC5.8□□□□□ -1.48
NUP88Q99567 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.8□□□□□ -1.48
NUP88Q99567 AC091057.2-201ENST00000602594 792 ntBASIC5.8□□□□□ -1.48
NUP88Q99567 AC020910.3-201ENST00000603701 874 ntBASIC5.8□□□□□ -1.48
NUP88Q99567 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
NUP88Q99567 AC107952.2-201ENST00000606048 486 ntBASIC5.8□□□□□ -1.48
NUP88Q99567 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC5.8□□□□□ -1.48
NUP88Q99567 AC091304.6-201ENST00000619761 202 ntBASIC5.8□□□□□ -1.48
NUP88Q99567 AC016717.3-201ENST00000624730 554 ntBASIC5.8□□□□□ -1.48
NUP88Q99567 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
NUP88Q99567 AC125336.1-201ENST00000508893 2827 ntBASIC5.8□□□□□ -1.48
NUP88Q99567 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NUP88Q99567 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NUP88Q99567 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NUP88Q99567 AC097063.1-201ENST00000426714 1797 ntBASIC5.8□□□□□ -1.48
NUP88Q99567 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.8□□□□□ -1.48
NUP88Q99567 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
NUP88Q99567 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NUP88Q99567 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.79□□□□□ -1.48
NUP88Q99567 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NUP88Q99567 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
NUP88Q99567 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.79□□□□□ -1.48
NUP88Q99567 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.79□□□□□ -1.48
NUP88Q99567 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NUP88Q99567 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.79□□□□□ -1.48
NUP88Q99567 AC006042.3-201ENST00000454684 1469 ntBASIC5.79□□□□□ -1.48
NUP88Q99567 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NUP88Q99567 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
NUP88Q99567 OR1L1-202ENST00000373686 1083 ntBASIC5.79□□□□□ -1.48
NUP88Q99567 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NUP88Q99567 U3.32-201ENST00000408116 212 ntBASIC5.79□□□□□ -1.48
NUP88Q99567 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC5.79□□□□□ -1.48
NUP88Q99567 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC5.79□□□□□ -1.48
NUP88Q99567 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.79□□□□□ -1.48
NUP88Q99567 AL807761.1-201ENST00000417622 171 ntBASIC5.79□□□□□ -1.48
NUP88Q99567 AC019050.1-201ENST00000418508 492 ntBASIC5.79□□□□□ -1.48
NUP88Q99567 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC5.79□□□□□ -1.48
NUP88Q99567 AP001324.1-201ENST00000428553 399 ntBASIC5.79□□□□□ -1.48
NUP88Q99567 AC073069.1-201ENST00000428657 441 ntBASIC5.79□□□□□ -1.48
NUP88Q99567 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC5.79□□□□□ -1.48
NUP88Q99567 TXNP5-201ENST00000441043 315 ntBASIC5.79□□□□□ -1.48
NUP88Q99567 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC5.79□□□□□ -1.48
NUP88Q99567 AC005229.2-201ENST00000456995 399 ntBASIC5.79□□□□□ -1.48
NUP88Q99567 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.79□□□□□ -1.48
NUP88Q99567 AL161747.1-201ENST00000480068 358 ntBASIC5.79□□□□□ -1.48
NUP88Q99567 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.79□□□□□ -1.48
NUP88Q99567 AC084024.2-201ENST00000503480 791 ntBASIC5.79□□□□□ -1.48
NUP88Q99567 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5.79□□□□□ -1.48
NUP88Q99567 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC5.79□□□□□ -1.48
NUP88Q99567 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.79□□□□□ -1.48
NUP88Q99567 GAPDHP56-201ENST00000506031 988 ntBASIC5.79□□□□□ -1.48
NUP88Q99567 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.79□□□□□ -1.48
NUP88Q99567 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC5.79□□□□□ -1.48
NUP88Q99567 COX6B1P6-201ENST00000522347 255 ntBASIC5.79□□□□□ -1.48
NUP88Q99567 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.79□□□□□ -1.48
NUP88Q99567 HIGD1AP5-201ENST00000529959 259 ntBASIC5.79□□□□□ -1.48
NUP88Q99567 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.79□□□□□ -1.48
NUP88Q99567 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.79□□□□□ -1.48
NUP88Q99567 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.79□□□□□ -1.48
NUP88Q99567 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.79□□□□□ -1.48
NUP88Q99567 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.79□□□□□ -1.48
NUP88Q99567 AC009852.2-201ENST00000567898 485 ntBASIC5.79□□□□□ -1.48
NUP88Q99567 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5.79□□□□□ -1.48
NUP88Q99567 MIR3667-201ENST00000581025 74 ntBASIC5.79□□□□□ -1.48
NUP88Q99567 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.79□□□□□ -1.48
NUP88Q99567 AP001269.3-201ENST00000588718 329 ntBASIC5.79□□□□□ -1.48
NUP88Q99567 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC5.79□□□□□ -1.48
NUP88Q99567 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.79□□□□□ -1.48
NUP88Q99567 AL158163.2-201ENST00000619110 700 ntBASIC5.79□□□□□ -1.48
NUP88Q99567 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.79□□□□□ -1.48
NUP88Q99567 AC019226.2-201ENST00000625973 424 ntBASIC5.79□□□□□ -1.48
NUP88Q99567 MTND2P41-201ENST00000637599 773 ntBASIC5.79□□□□□ -1.48
NUP88Q99567 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.79□□□□□ -1.48
NUP88Q99567 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.79□□□□□ -1.48
NUP88Q99567 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.79□□□□□ -1.48
NUP88Q99567 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
NUP88Q99567 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NUP88Q99567 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.79□□□□□ -1.48
NUP88Q99567 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.79□□□□□ -1.48
NUP88Q99567 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.79□□□□□ -1.48
NUP88Q99567 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
NUP88Q99567 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
NUP88Q99567 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NUP88Q99567 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
NUP88Q99567 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
NUP88Q99567 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.78□□□□□ -1.48
NUP88Q99567 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NUP88Q99567 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.78□□□□□ -1.48
NUP88Q99567 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
NUP88Q99567 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
NUP88Q99567 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
NUP88Q99567 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
NUP88Q99567 RNY3P9-201ENST00000384727 106 ntBASIC5.78□□□□□ -1.48
NUP88Q99567 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
NUP88Q99567 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NUP88Q99567 AC234782.4-201ENST00000417646 1048 ntBASIC5.78□□□□□ -1.48
NUP88Q99567 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.78□□□□□ -1.48
NUP88Q99567 AC027644.1-201ENST00000419595 298 ntBASIC5.78□□□□□ -1.48
NUP88Q99567 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.78□□□□□ -1.48
NUP88Q99567 RPL7P4-203ENST00000430239 730 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms