Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AC011233.1-201ENST00000422812 283 ntBASIC5.15□□□□□ -1.59
RNF220Q5VTB9 TXNL1P1-201ENST00000429528 554 ntBASIC5.15□□□□□ -1.59
RNF220Q5VTB9 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.15□□□□□ -1.59
RNF220Q5VTB9 RPS20P1-201ENST00000434853 354 ntBASIC5.15□□□□□ -1.59
RNF220Q5VTB9 AC006335.2-201ENST00000437993 330 ntBASIC5.15□□□□□ -1.59
RNF220Q5VTB9 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.15□□□□□ -1.59
RNF220Q5VTB9 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RNF220Q5VTB9 IGBP1P3-201ENST00000447449 1000 ntBASIC5.15□□□□□ -1.59
RNF220Q5VTB9 AC108463.1-201ENST00000450258 347 ntBASIC5.15□□□□□ -1.59
RNF220Q5VTB9 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC5.15□□□□□ -1.59
RNF220Q5VTB9 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.15□□□□□ -1.59
RNF220Q5VTB9 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.15□□□□□ -1.59
RNF220Q5VTB9 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC5.15□□□□□ -1.59
RNF220Q5VTB9 HMGB3P16-201ENST00000508037 287 ntBASIC5.15□□□□□ -1.59
RNF220Q5VTB9 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RNF220Q5VTB9 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.15□□□□□ -1.59
RNF220Q5VTB9 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.15□□□□□ -1.59
RNF220Q5VTB9 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.15□□□□□ -1.59
RNF220Q5VTB9 UBE2NP1-201ENST00000545592 458 ntBASIC5.15□□□□□ -1.59
RNF220Q5VTB9 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.15□□□□□ -1.59
RNF220Q5VTB9 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC5.15□□□□□ -1.59
RNF220Q5VTB9 AC109446.2-201ENST00000567872 497 ntBASIC5.15□□□□□ -1.59
RNF220Q5VTB9 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC5.15□□□□□ -1.59
RNF220Q5VTB9 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC5.15□□□□□ -1.59
RNF220Q5VTB9 AC006539.2-201ENST00000601729 572 ntBASIC5.15□□□□□ -1.59
RNF220Q5VTB9 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC5.15□□□□□ -1.59
RNF220Q5VTB9 AC103881.1-201ENST00000603476 538 ntBASIC5.15□□□□□ -1.59
RNF220Q5VTB9 AC005191.1-201ENST00000603950 358 ntBASIC5.15□□□□□ -1.59
RNF220Q5VTB9 AC097505.1-201ENST00000610199 565 ntBASIC5.15□□□□□ -1.59
RNF220Q5VTB9 MIR6864-201ENST00000617935 70 ntBASIC5.15□□□□□ -1.59
RNF220Q5VTB9 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC5.15□□□□□ -1.59
RNF220Q5VTB9 AC009039.2-201ENST00000624524 529 ntBASIC5.15□□□□□ -1.59
RNF220Q5VTB9 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RNF220Q5VTB9 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC5.15□□□□□ -1.59
RNF220Q5VTB9 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.15□□□□□ -1.59
RNF220Q5VTB9 AC087565.3-203ENST00000641018 837 ntBASIC5.15□□□□□ -1.59
RNF220Q5VTB9 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RNF220Q5VTB9 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
RNF220Q5VTB9 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.15□□□□□ -1.59
RNF220Q5VTB9 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.59
RNF220Q5VTB9 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
RNF220Q5VTB9 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RNF220Q5VTB9 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.59
RNF220Q5VTB9 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
RNF220Q5VTB9 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RNF220Q5VTB9 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.15□□□□□ -1.59
RNF220Q5VTB9 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.14□□□□□ -1.59
RNF220Q5VTB9 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RNF220Q5VTB9 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
RNF220Q5VTB9 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RNF220Q5VTB9 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
RNF220Q5VTB9 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.14□□□□□ -1.59
RNF220Q5VTB9 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.14□□□□□ -1.59
RNF220Q5VTB9 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RNF220Q5VTB9 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
RNF220Q5VTB9 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RNF220Q5VTB9 RNU6-931P-201ENST00000363850 107 ntBASIC5.14□□□□□ -1.59
RNF220Q5VTB9 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
RNF220Q5VTB9 AC068533.2-201ENST00000411872 306 ntBASIC5.14□□□□□ -1.59
RNF220Q5VTB9 AC004074.1-201ENST00000421810 1063 ntBASIC5.14□□□□□ -1.59
RNF220Q5VTB9 AL365203.2-201ENST00000423444 196 ntBASIC5.14□□□□□ -1.59
RNF220Q5VTB9 RPL7P56-201ENST00000429441 717 ntBASIC5.14□□□□□ -1.59
RNF220Q5VTB9 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.14□□□□□ -1.59
RNF220Q5VTB9 HMGB3P24-201ENST00000433260 622 ntBASIC5.14□□□□□ -1.59
RNF220Q5VTB9 AC008072.1-201ENST00000434254 824 ntBASIC5.14□□□□□ -1.59
RNF220Q5VTB9 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.14□□□□□ -1.59
RNF220Q5VTB9 AC016772.1-201ENST00000444170 1261 ntBASIC5.14□□□□□ -1.59
RNF220Q5VTB9 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC5.14□□□□□ -1.59
RNF220Q5VTB9 AP006222.1-205ENST00000450734 457 ntBASIC5.14□□□□□ -1.59
RNF220Q5VTB9 AL358876.1-201ENST00000453364 1075 ntBASIC5.14□□□□□ -1.59
RNF220Q5VTB9 AL645937.3-201ENST00000453647 936 ntBASIC5.14□□□□□ -1.59
RNF220Q5VTB9 AZGP1P2-201ENST00000454506 345 ntBASIC5.14□□□□□ -1.59
RNF220Q5VTB9 RN7SL168P-201ENST00000463821 279 ntBASIC5.14□□□□□ -1.59
RNF220Q5VTB9 RPS23P6-201ENST00000466136 431 ntBASIC5.14□□□□□ -1.59
RNF220Q5VTB9 AC013828.1-201ENST00000481845 158 ntBASIC5.14□□□□□ -1.59
RNF220Q5VTB9 RPL37P23-201ENST00000492641 294 ntBASIC5.14□□□□□ -1.59
RNF220Q5VTB9 RPF2P2-201ENST00000504693 896 ntBASIC5.14□□□□□ -1.59
RNF220Q5VTB9 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC5.14□□□□□ -1.59
RNF220Q5VTB9 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.14□□□□□ -1.59
RNF220Q5VTB9 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC5.14□□□□□ -1.59
RNF220Q5VTB9 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.14□□□□□ -1.59
RNF220Q5VTB9 MRPS16P1-201ENST00000523462 412 ntBASIC5.14□□□□□ -1.59
RNF220Q5VTB9 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.14□□□□□ -1.59
RNF220Q5VTB9 AC024405.1-201ENST00000532521 1042 ntBASIC5.14□□□□□ -1.59
RNF220Q5VTB9 TOMM20P1-201ENST00000534518 427 ntBASIC5.14□□□□□ -1.59
RNF220Q5VTB9 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC5.14□□□□□ -1.59
RNF220Q5VTB9 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC5.14□□□□□ -1.59
RNF220Q5VTB9 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC5.14□□□□□ -1.59
RNF220Q5VTB9 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.14□□□□□ -1.59
RNF220Q5VTB9 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC5.14□□□□□ -1.59
RNF220Q5VTB9 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.14□□□□□ -1.59
RNF220Q5VTB9 MIR4512-201ENST00000583257 77 ntBASIC5.14□□□□□ -1.59
RNF220Q5VTB9 AC011477.5-201ENST00000586571 259 ntBASIC5.14□□□□□ -1.59
RNF220Q5VTB9 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC5.14□□□□□ -1.59
RNF220Q5VTB9 AC067773.1-201ENST00000603284 1094 ntBASIC5.14□□□□□ -1.59
RNF220Q5VTB9 Z99497.2-201ENST00000603634 310 ntBASIC5.14□□□□□ -1.59
RNF220Q5VTB9 AC091946.2-201ENST00000606105 291 ntBASIC5.14□□□□□ -1.59
RNF220Q5VTB9 AC098679.5-201ENST00000624394 571 ntBASIC5.14□□□□□ -1.59
RNF220Q5VTB9 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.14□□□□□ -1.59
RNF220Q5VTB9 MIR3974-201ENST00000637126 96 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms