Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC3.92□□□□□ -1.78
VPS29Q9UBQ0 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.92□□□□□ -1.78
VPS29Q9UBQ0 AL158073.1-201ENST00000426848 1104 ntBASIC3.92□□□□□ -1.78
VPS29Q9UBQ0 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC3.92□□□□□ -1.78
VPS29Q9UBQ0 BX119904.1-201ENST00000432026 348 ntBASIC3.92□□□□□ -1.78
VPS29Q9UBQ0 MTND2P2-201ENST00000434633 945 ntBASIC3.92□□□□□ -1.78
VPS29Q9UBQ0 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.92□□□□□ -1.78
VPS29Q9UBQ0 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.92□□□□□ -1.78
VPS29Q9UBQ0 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.92□□□□□ -1.78
VPS29Q9UBQ0 TPTE2P3-201ENST00000441562 1189 ntBASIC3.92□□□□□ -1.78
VPS29Q9UBQ0 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.92□□□□□ -1.78
VPS29Q9UBQ0 CEACAMP9-201ENST00000442990 513 ntBASIC3.92□□□□□ -1.78
VPS29Q9UBQ0 EIF2S2P2-201ENST00000447161 982 ntBASIC3.92□□□□□ -1.78
VPS29Q9UBQ0 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC3.92□□□□□ -1.78
VPS29Q9UBQ0 AC091167.1-201ENST00000492017 396 ntBASIC3.92□□□□□ -1.78
VPS29Q9UBQ0 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.92□□□□□ -1.78
VPS29Q9UBQ0 AC139783.2-201ENST00000504847 1145 ntBASIC3.92□□□□□ -1.78
VPS29Q9UBQ0 CDH12P4-201ENST00000517835 295 ntBASIC3.92□□□□□ -1.78
VPS29Q9UBQ0 CDH12P3-201ENST00000517935 295 ntBASIC3.92□□□□□ -1.78
VPS29Q9UBQ0 CDH12P1-201ENST00000518435 295 ntBASIC3.92□□□□□ -1.78
VPS29Q9UBQ0 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC3.92□□□□□ -1.78
VPS29Q9UBQ0 MTND1P6-201ENST00000523621 946 ntBASIC3.92□□□□□ -1.78
VPS29Q9UBQ0 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
VPS29Q9UBQ0 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.92□□□□□ -1.78
VPS29Q9UBQ0 MTND2P13-201ENST00000577438 1039 ntBASIC3.92□□□□□ -1.78
VPS29Q9UBQ0 AC068790.4-201ENST00000602474 263 ntBASIC3.92□□□□□ -1.78
VPS29Q9UBQ0 AL451044.1-201ENST00000604867 238 ntBASIC3.92□□□□□ -1.78
VPS29Q9UBQ0 AC128687.2-201ENST00000609657 566 ntBASIC3.92□□□□□ -1.78
VPS29Q9UBQ0 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.92□□□□□ -1.78
VPS29Q9UBQ0 MIR3653-201ENST00000625572 110 ntBASIC3.92□□□□□ -1.78
VPS29Q9UBQ0 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.92□□□□□ -1.78
VPS29Q9UBQ0 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.92□□□□□ -1.78
VPS29Q9UBQ0 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.92□□□□□ -1.78
VPS29Q9UBQ0 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
VPS29Q9UBQ0 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.92□□□□□ -1.78
VPS29Q9UBQ0 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
VPS29Q9UBQ0 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
VPS29Q9UBQ0 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
VPS29Q9UBQ0 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
VPS29Q9UBQ0 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC3.92□□□□□ -1.78
VPS29Q9UBQ0 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
VPS29Q9UBQ0 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
VPS29Q9UBQ0 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.91□□□□□ -1.78
VPS29Q9UBQ0 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
VPS29Q9UBQ0 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.91□□□□□ -1.78
VPS29Q9UBQ0 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.91□□□□□ -1.78
VPS29Q9UBQ0 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VPS29Q9UBQ0 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.91□□□□□ -1.78
VPS29Q9UBQ0 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
VPS29Q9UBQ0 MIR383-201ENST00000362257 73 ntBASIC3.91□□□□□ -1.78
VPS29Q9UBQ0 SNORA60-201ENST00000362396 134 ntBASIC3.91□□□□□ -1.78
VPS29Q9UBQ0 SNORD35B-201ENST00000363660 87 ntBASIC3.91□□□□□ -1.78
VPS29Q9UBQ0 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
VPS29Q9UBQ0 FAR2P2-201ENST00000413041 594 ntBASIC3.91□□□□□ -1.78
VPS29Q9UBQ0 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
VPS29Q9UBQ0 AL592293.2-201ENST00000422292 996 ntBASIC3.91□□□□□ -1.78
VPS29Q9UBQ0 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.91□□□□□ -1.78
VPS29Q9UBQ0 AL358472.1-201ENST00000431295 329 ntBASIC3.91□□□□□ -1.78
VPS29Q9UBQ0 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.91□□□□□ -1.78
VPS29Q9UBQ0 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.91□□□□□ -1.78
VPS29Q9UBQ0 RN7SL481P-201ENST00000477764 299 ntBASIC3.91□□□□□ -1.78
VPS29Q9UBQ0 RN7SL459P-201ENST00000481078 302 ntBASIC3.91□□□□□ -1.78
VPS29Q9UBQ0 KRT19P6-201ENST00000510983 209 ntBASIC3.91□□□□□ -1.78
VPS29Q9UBQ0 AC090819.1-201ENST00000523800 1111 ntBASIC3.91□□□□□ -1.78
VPS29Q9UBQ0 OR7E10P-201ENST00000526420 991 ntBASIC3.91□□□□□ -1.78
VPS29Q9UBQ0 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.91□□□□□ -1.78
VPS29Q9UBQ0 AC009643.1-201ENST00000532030 391 ntBASIC3.91□□□□□ -1.78
VPS29Q9UBQ0 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.91□□□□□ -1.78
VPS29Q9UBQ0 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.91□□□□□ -1.78
VPS29Q9UBQ0 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.91□□□□□ -1.78
VPS29Q9UBQ0 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.91□□□□□ -1.78
VPS29Q9UBQ0 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
VPS29Q9UBQ0 AC068020.1-201ENST00000594215 661 ntBASIC3.91□□□□□ -1.78
VPS29Q9UBQ0 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.91□□□□□ -1.78
VPS29Q9UBQ0 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
VPS29Q9UBQ0 IPO5P1-202ENST00000600039 287 ntBASIC3.91□□□□□ -1.78
VPS29Q9UBQ0 AL713998.2-201ENST00000604538 1198 ntBASIC3.91□□□□□ -1.78
VPS29Q9UBQ0 AC114878.2-201ENST00000604863 1251 ntBASIC3.91□□□□□ -1.78
VPS29Q9UBQ0 AL356121.2-201ENST00000624715 780 ntBASIC3.91□□□□□ -1.78
VPS29Q9UBQ0 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.91□□□□□ -1.78
VPS29Q9UBQ0 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.91□□□□□ -1.78
VPS29Q9UBQ0 BX005019.1-201ENST00000561881 1810 ntBASIC3.91□□□□□ -1.78
VPS29Q9UBQ0 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
VPS29Q9UBQ0 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
VPS29Q9UBQ0 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
VPS29Q9UBQ0 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
VPS29Q9UBQ0 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.9□□□□□ -1.79
VPS29Q9UBQ0 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.9□□□□□ -1.79
VPS29Q9UBQ0 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC3.9□□□□□ -1.79
VPS29Q9UBQ0 MTND4LP13-201ENST00000425022 298 ntBASIC3.9□□□□□ -1.79
VPS29Q9UBQ0 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC3.9□□□□□ -1.79
VPS29Q9UBQ0 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC3.9□□□□□ -1.79
VPS29Q9UBQ0 OR52Y1P-201ENST00000452418 828 ntBASIC3.9□□□□□ -1.79
VPS29Q9UBQ0 RPL38P1-201ENST00000460914 211 ntBASIC3.9□□□□□ -1.79
VPS29Q9UBQ0 AC092691.2-201ENST00000461787 803 ntBASIC3.9□□□□□ -1.79
VPS29Q9UBQ0 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.9□□□□□ -1.79
VPS29Q9UBQ0 UQCRHP4-201ENST00000471686 272 ntBASIC3.9□□□□□ -1.79
VPS29Q9UBQ0 RPL31P61-201ENST00000496160 376 ntBASIC3.9□□□□□ -1.79
VPS29Q9UBQ0 AC083829.1-201ENST00000503756 657 ntBASIC3.9□□□□□ -1.79
VPS29Q9UBQ0 AC106806.2-201ENST00000509365 500 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms