Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AL773545.4-201ENST00000637262 310 ntBASIC6.32□□□□□ -1.4
CLIP1P30622 AL513478.4-201ENST00000641636 310 ntBASIC6.32□□□□□ -1.4
CLIP1P30622 AC139713.2-215ENST00000641428 5037 ntBASIC6.32□□□□□ -1.4
CLIP1P30622 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CLIP1P30622 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
CLIP1P30622 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
CLIP1P30622 AL672167.2-201ENST00000377164 879 ntBASIC6.31□□□□□ -1.4
CLIP1P30622 U1.1-201ENST00000384101 164 ntBASIC6.31□□□□□ -1.4
CLIP1P30622 AL590704.1-201ENST00000402856 794 ntBASIC6.31□□□□□ -1.4
CLIP1P30622 Z97055.1-201ENST00000419730 712 ntBASIC6.31□□□□□ -1.4
CLIP1P30622 GAS5-223ENST00000452197 483 ntTSL 3 BASIC6.31□□□□□ -1.4
CLIP1P30622 NANOGP10-201ENST00000453325 895 ntBASIC6.31□□□□□ -1.4
CLIP1P30622 ANK3-207ENST00000460468 677 ntTSL 3 BASIC6.31□□□□□ -1.4
CLIP1P30622 AC015726.1-201ENST00000602353 681 ntBASIC6.31□□□□□ -1.4
CLIP1P30622 AL049840.6-202ENST00000603373 279 ntBASIC6.31□□□□□ -1.4
CLIP1P30622 AC006363.1-201ENST00000603806 463 ntBASIC6.31□□□□□ -1.4
CLIP1P30622 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CLIP1P30622 TEX41-300ENST00000631048 69 ntTSL 5 BASIC6.31□□□□□ -1.4
CLIP1P30622 AF001550.2-201ENST00000636643 217 ntBASIC6.31□□□□□ -1.4
CLIP1P30622 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC6.31□□□□□ -1.4
CLIP1P30622 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
CLIP1P30622 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CLIP1P30622 AL031595.2-201ENST00000624215 19071 ntBASIC6.3□□□□□ -1.4
CLIP1P30622 AC120036.2-201ENST00000509729 1474 ntBASIC6.3□□□□□ -1.4
CLIP1P30622 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CLIP1P30622 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CLIP1P30622 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CLIP1P30622 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CLIP1P30622 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
CLIP1P30622 RNU1-108P-201ENST00000362556 161 ntBASIC6.3□□□□□ -1.4
CLIP1P30622 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC6.3□□□□□ -1.4
CLIP1P30622 U8.11-201ENST00000384699 133 ntBASIC6.3□□□□□ -1.4
CLIP1P30622 U8.12-201ENST00000384701 133 ntBASIC6.3□□□□□ -1.4
CLIP1P30622 MIR200C-201ENST00000384980 68 ntBASIC6.3□□□□□ -1.4
CLIP1P30622 SNORA57.3-201ENST00000411095 141 ntBASIC6.3□□□□□ -1.4
CLIP1P30622 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CLIP1P30622 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC6.3□□□□□ -1.4
CLIP1P30622 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC6.3□□□□□ -1.4
CLIP1P30622 U8.18-201ENST00000459285 133 ntBASIC6.3□□□□□ -1.4
CLIP1P30622 RPL7P24-201ENST00000493052 752 ntBASIC6.3□□□□□ -1.4
CLIP1P30622 RN7SKP141-201ENST00000516167 338 ntBASIC6.3□□□□□ -1.4
CLIP1P30622 IGKV2-38-201ENST00000517443 247 ntBASIC6.3□□□□□ -1.4
CLIP1P30622 PAICSP4-201ENST00000517543 1253 ntBASIC6.3□□□□□ -1.4
CLIP1P30622 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC6.3□□□□□ -1.4
CLIP1P30622 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC6.3□□□□□ -1.4
CLIP1P30622 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC6.3□□□□□ -1.4
CLIP1P30622 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC6.3□□□□□ -1.4
CLIP1P30622 AL645927.2-201ENST00000618350 349 ntBASIC6.3□□□□□ -1.4
CLIP1P30622 AC124312.6-202ENST00000623624 418 ntBASIC6.3□□□□□ -1.4
CLIP1P30622 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC6.3□□□□□ -1.4
CLIP1P30622 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CLIP1P30622 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC6.3□□□□□ -1.4
CLIP1P30622 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CLIP1P30622 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
CLIP1P30622 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC6.29□□□□□ -1.4
CLIP1P30622 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CLIP1P30622 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CLIP1P30622 RNA5SP387-201ENST00000364226 106 ntBASIC6.29□□□□□ -1.4
CLIP1P30622 RN7SKP156-201ENST00000410308 342 ntBASIC6.29□□□□□ -1.4
CLIP1P30622 YME1L1P1-201ENST00000429435 297 ntBASIC6.29□□□□□ -1.4
CLIP1P30622 NPM1P25-201ENST00000429734 854 ntBASIC6.29□□□□□ -1.4
CLIP1P30622 Z74696.2-201ENST00000436514 498 ntBASIC6.29□□□□□ -1.4
CLIP1P30622 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC6.29□□□□□ -1.4
CLIP1P30622 ACTR3P3-201ENST00000480448 893 ntBASIC6.29□□□□□ -1.4
CLIP1P30622 RPS3AP6-201ENST00000484430 795 ntBASIC6.29□□□□□ -1.4
CLIP1P30622 AC026782.2-201ENST00000510845 636 ntBASIC6.29□□□□□ -1.4
CLIP1P30622 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC6.29□□□□□ -1.4
CLIP1P30622 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC6.29□□□□□ -1.4
CLIP1P30622 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC6.29□□□□□ -1.4
CLIP1P30622 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC6.29□□□□□ -1.4
CLIP1P30622 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC6.29□□□□□ -1.4
CLIP1P30622 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC6.29□□□□□ -1.4
CLIP1P30622 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CLIP1P30622 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CLIP1P30622 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CLIP1P30622 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
CLIP1P30622 AL627171.1-201ENST00000618845 1308 ntBASIC6.29□□□□□ -1.4
CLIP1P30622 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
CLIP1P30622 MAPK10-320ENST00000641462 6696 ntBASIC6.28□□□□□ -1.4
CLIP1P30622 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.28□□□□□ -1.4
CLIP1P30622 RNU6-761P-201ENST00000384148 107 ntBASIC6.28□□□□□ -1.4
CLIP1P30622 SNORA11.1-201ENST00000408133 129 ntBASIC6.28□□□□□ -1.4
CLIP1P30622 MTCO1P54-201ENST00000430139 712 ntBASIC6.28□□□□□ -1.4
CLIP1P30622 HIGD1AP4-201ENST00000430194 280 ntBASIC6.28□□□□□ -1.4
CLIP1P30622 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CLIP1P30622 RPS17P13-201ENST00000448974 407 ntBASIC6.28□□□□□ -1.4
CLIP1P30622 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC6.28□□□□□ -1.4
CLIP1P30622 RPS20P21-201ENST00000466859 343 ntBASIC6.28□□□□□ -1.4
CLIP1P30622 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC6.28□□□□□ -1.4
CLIP1P30622 AC022336.1-201ENST00000475510 337 ntBASIC6.28□□□□□ -1.4
CLIP1P30622 RPL31P61-201ENST00000496160 376 ntBASIC6.28□□□□□ -1.4
CLIP1P30622 STMN1P2-201ENST00000508435 439 ntBASIC6.28□□□□□ -1.4
CLIP1P30622 AC017037.1-201ENST00000508460 471 ntBASIC6.28□□□□□ -1.4
CLIP1P30622 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC6.28□□□□□ -1.4
CLIP1P30622 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC6.28□□□□□ -1.4
CLIP1P30622 PTS-202ENST00000524931 696 ntTSL 3 BASIC6.28□□□□□ -1.4
CLIP1P30622 AC069240.1-201ENST00000548774 375 ntBASIC6.28□□□□□ -1.4
CLIP1P30622 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC6.28□□□□□ -1.4
CLIP1P30622 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
CLIP1P30622 MAPK10-253ENST00000641010 4072 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms