Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HLA-DMAP28067 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HLA-DMAP28067 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
HLA-DMAP28067 RNU1-18P-201ENST00000363062 164 ntBASIC3.7□□□□□ -1.82
HLA-DMAP28067 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC3.7□□□□□ -1.82
HLA-DMAP28067 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HLA-DMAP28067 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC3.7□□□□□ -1.82
HLA-DMAP28067 SNORA37-201ENST00000384504 129 ntBASIC3.7□□□□□ -1.82
HLA-DMAP28067 OR1F12-201ENST00000402365 945 ntBASIC3.7□□□□□ -1.82
HLA-DMAP28067 AP000357.1-201ENST00000409926 1165 ntBASIC3.7□□□□□ -1.82
HLA-DMAP28067 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.7□□□□□ -1.82
HLA-DMAP28067 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC3.7□□□□□ -1.82
HLA-DMAP28067 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC3.7□□□□□ -1.82
HLA-DMAP28067 AC016831.4-201ENST00000438302 307 ntBASIC3.7□□□□□ -1.82
HLA-DMAP28067 AL353093.1-201ENST00000441292 436 ntBASIC3.7□□□□□ -1.82
HLA-DMAP28067 MTCO3P17-201ENST00000443775 513 ntBASIC3.7□□□□□ -1.82
HLA-DMAP28067 TRY2P-201ENST00000448860 689 ntBASIC3.7□□□□□ -1.82
HLA-DMAP28067 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.7□□□□□ -1.82
HLA-DMAP28067 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC3.7□□□□□ -1.82
HLA-DMAP28067 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC3.7□□□□□ -1.82
HLA-DMAP28067 RPL5P32-201ENST00000454085 879 ntBASIC3.7□□□□□ -1.82
HLA-DMAP28067 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.7□□□□□ -1.82
HLA-DMAP28067 RPL7AP6-201ENST00000477943 801 ntBASIC3.7□□□□□ -1.82
HLA-DMAP28067 MTND4LP2-201ENST00000502312 285 ntBASIC3.7□□□□□ -1.82
HLA-DMAP28067 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.7□□□□□ -1.82
HLA-DMAP28067 KCTD9P2-201ENST00000512203 1013 ntBASIC3.7□□□□□ -1.82
HLA-DMAP28067 FTH1P9-201ENST00000513251 355 ntBASIC3.7□□□□□ -1.82
HLA-DMAP28067 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC3.7□□□□□ -1.82
HLA-DMAP28067 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC3.7□□□□□ -1.82
HLA-DMAP28067 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC3.7□□□□□ -1.82
HLA-DMAP28067 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC3.7□□□□□ -1.82
HLA-DMAP28067 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HLA-DMAP28067 AC016180.1-201ENST00000567945 403 ntBASIC3.7□□□□□ -1.82
HLA-DMAP28067 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC3.7□□□□□ -1.82
HLA-DMAP28067 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC3.7□□□□□ -1.82
HLA-DMAP28067 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC3.7□□□□□ -1.82
HLA-DMAP28067 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC3.7□□□□□ -1.82
HLA-DMAP28067 MRPS35P3-201ENST00000603189 709 ntBASIC3.7□□□□□ -1.82
HLA-DMAP28067 C2orf27A-204ENST00000623058 969 ntBASIC3.7□□□□□ -1.82
HLA-DMAP28067 AC112694.2-201ENST00000623697 768 ntBASIC3.7□□□□□ -1.82
HLA-DMAP28067 CNOT6LP1-201ENST00000559681 1462 ntBASIC3.7□□□□□ -1.82
HLA-DMAP28067 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
HLA-DMAP28067 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC3.7□□□□□ -1.82
HLA-DMAP28067 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HLA-DMAP28067 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.69□□□□□ -1.82
HLA-DMAP28067 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
HLA-DMAP28067 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.69□□□□□ -1.82
HLA-DMAP28067 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HLA-DMAP28067 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
HLA-DMAP28067 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HLA-DMAP28067 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
HLA-DMAP28067 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.69□□□□□ -1.82
HLA-DMAP28067 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC3.69□□□□□ -1.82
HLA-DMAP28067 RPL30P2-201ENST00000414021 291 ntBASIC3.69□□□□□ -1.82
HLA-DMAP28067 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.69□□□□□ -1.82
HLA-DMAP28067 AL161631.1-201ENST00000417933 486 ntBASIC3.69□□□□□ -1.82
HLA-DMAP28067 RPS12P23-201ENST00000419579 400 ntBASIC3.69□□□□□ -1.82
HLA-DMAP28067 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC3.69□□□□□ -1.82
HLA-DMAP28067 NPM1P26-201ENST00000426339 738 ntBASIC3.69□□□□□ -1.82
HLA-DMAP28067 AC007559.1-201ENST00000428736 355 ntBASIC3.69□□□□□ -1.82
HLA-DMAP28067 MTCO1P54-201ENST00000430139 712 ntBASIC3.69□□□□□ -1.82
HLA-DMAP28067 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.69□□□□□ -1.82
HLA-DMAP28067 AL049745.1-201ENST00000433953 286 ntBASIC3.69□□□□□ -1.82
HLA-DMAP28067 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC3.69□□□□□ -1.82
HLA-DMAP28067 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.69□□□□□ -1.82
HLA-DMAP28067 RPL23AP43-201ENST00000446445 471 ntBASIC3.69□□□□□ -1.82
HLA-DMAP28067 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC3.69□□□□□ -1.82
HLA-DMAP28067 AC110749.1-201ENST00000462007 357 ntBASIC3.69□□□□□ -1.82
HLA-DMAP28067 AC087385.1-201ENST00000475062 312 ntBASIC3.69□□□□□ -1.82
HLA-DMAP28067 RPL31P61-201ENST00000496160 376 ntBASIC3.69□□□□□ -1.82
HLA-DMAP28067 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
HLA-DMAP28067 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HLA-DMAP28067 RN7SKP276-201ENST00000516242 268 ntBASIC3.69□□□□□ -1.82
HLA-DMAP28067 IGKV2-38-201ENST00000517443 247 ntBASIC3.69□□□□□ -1.82
HLA-DMAP28067 SOX5P1-201ENST00000524155 1127 ntBASIC3.69□□□□□ -1.82
HLA-DMAP28067 AC008033.2-201ENST00000542626 177 ntBASIC3.69□□□□□ -1.82
HLA-DMAP28067 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HLA-DMAP28067 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HLA-DMAP28067 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.69□□□□□ -1.82
HLA-DMAP28067 AC073091.2-201ENST00000603205 907 ntBASIC3.69□□□□□ -1.82
HLA-DMAP28067 AC087763.1-201ENST00000603391 286 ntBASIC3.69□□□□□ -1.82
HLA-DMAP28067 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HLA-DMAP28067 AP003072.4-201ENST00000624580 310 ntBASIC3.69□□□□□ -1.82
HLA-DMAP28067 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.69□□□□□ -1.82
HLA-DMAP28067 AC004808.2-201ENST00000627965 773 ntBASIC3.69□□□□□ -1.82
HLA-DMAP28067 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.69□□□□□ -1.82
HLA-DMAP28067 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
HLA-DMAP28067 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.69□□□□□ -1.82
HLA-DMAP28067 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HLA-DMAP28067 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HLA-DMAP28067 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HLA-DMAP28067 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
HLA-DMAP28067 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-DMAP28067 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-DMAP28067 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
HLA-DMAP28067 RNA5SP123-201ENST00000363244 119 ntBASIC3.68□□□□□ -1.82
HLA-DMAP28067 U8.4-201ENST00000363626 134 ntBASIC3.68□□□□□ -1.82
HLA-DMAP28067 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
HLA-DMAP28067 RNU6-171P-201ENST00000384354 107 ntBASIC3.68□□□□□ -1.82
HLA-DMAP28067 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms