Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
SGCEO43556 RN7SKP167-201ENST00000411047 285 ntBASIC3.86□□□□□ -1.79
SGCEO43556 AC069213.2-201ENST00000420238 366 ntBASIC3.86□□□□□ -1.79
SGCEO43556 AL138785.1-201ENST00000425821 331 ntBASIC3.86□□□□□ -1.79
SGCEO43556 UBE2V1P3-201ENST00000439651 417 ntBASIC3.86□□□□□ -1.79
SGCEO43556 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC3.86□□□□□ -1.79
SGCEO43556 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC3.86□□□□□ -1.79
SGCEO43556 RPL31P53-201ENST00000457065 348 ntBASIC3.86□□□□□ -1.79
SGCEO43556 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
SGCEO43556 RPL21P126-201ENST00000470049 478 ntBASIC3.86□□□□□ -1.79
SGCEO43556 RPL23AP71-201ENST00000470966 469 ntBASIC3.86□□□□□ -1.79
SGCEO43556 OR52A4P-201ENST00000472867 958 ntBASIC3.86□□□□□ -1.79
SGCEO43556 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.86□□□□□ -1.79
SGCEO43556 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.86□□□□□ -1.79
SGCEO43556 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC3.86□□□□□ -1.79
SGCEO43556 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.86□□□□□ -1.79
SGCEO43556 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.86□□□□□ -1.79
SGCEO43556 CBX3P5-201ENST00000552017 521 ntBASIC3.86□□□□□ -1.79
SGCEO43556 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.86□□□□□ -1.79
SGCEO43556 AC084783.1-201ENST00000565846 910 ntBASIC3.86□□□□□ -1.79
SGCEO43556 RPL23AP97-201ENST00000568955 471 ntBASIC3.86□□□□□ -1.79
SGCEO43556 MIR4512-201ENST00000583257 77 ntBASIC3.86□□□□□ -1.79
SGCEO43556 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.86□□□□□ -1.79
SGCEO43556 AC002044.3-201ENST00000623314 541 ntBASIC3.86□□□□□ -1.79
SGCEO43556 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.86□□□□□ -1.79
SGCEO43556 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.86□□□□□ -1.79
SGCEO43556 SPATA2P1-201ENST00000431223 2055 ntBASIC3.86□□□□□ -1.79
SGCEO43556 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
SGCEO43556 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
SGCEO43556 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
SGCEO43556 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SGCEO43556 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SGCEO43556 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SGCEO43556 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SGCEO43556 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
SGCEO43556 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SGCEO43556 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
SGCEO43556 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.85□□□□□ -1.79
SGCEO43556 RAD17P1-201ENST00000418130 2042 ntBASIC3.85□□□□□ -1.79
SGCEO43556 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.85□□□□□ -1.79
SGCEO43556 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
SGCEO43556 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
SGCEO43556 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SGCEO43556 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
SGCEO43556 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
SGCEO43556 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
SGCEO43556 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC3.85□□□□□ -1.79
SGCEO43556 MIR3065-201ENST00000390137 79 ntBASIC3.85□□□□□ -1.79
SGCEO43556 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
SGCEO43556 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
SGCEO43556 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
SGCEO43556 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SGCEO43556 AL138878.1-201ENST00000405131 347 ntBASIC3.85□□□□□ -1.79
SGCEO43556 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC3.85□□□□□ -1.79
SGCEO43556 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.85□□□□□ -1.79
SGCEO43556 AC073335.1-201ENST00000427776 363 ntBASIC3.85□□□□□ -1.79
SGCEO43556 MTCYBP29-201ENST00000436327 1006 ntBASIC3.85□□□□□ -1.79
SGCEO43556 AC114495.1-201ENST00000441274 436 ntBASIC3.85□□□□□ -1.79
SGCEO43556 AC053481.1-201ENST00000467217 306 ntBASIC3.85□□□□□ -1.79
SGCEO43556 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.85□□□□□ -1.79
SGCEO43556 F11-205ENST00000492972 1204 ntTSL 2 BASIC3.85□□□□□ -1.79
SGCEO43556 AC005912.1-201ENST00000495392 255 ntBASIC3.85□□□□□ -1.79
SGCEO43556 AC092045.1-201ENST00000495716 1231 ntBASIC3.85□□□□□ -1.79
SGCEO43556 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.85□□□□□ -1.79
SGCEO43556 AC020593.1-201ENST00000507399 299 ntBASIC3.85□□□□□ -1.79
SGCEO43556 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.85□□□□□ -1.79
SGCEO43556 AC015795.1-201ENST00000513669 327 ntBASIC3.85□□□□□ -1.79
SGCEO43556 RN7SKP92-201ENST00000517266 244 ntBASIC3.85□□□□□ -1.79
SGCEO43556 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.85□□□□□ -1.79
SGCEO43556 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.85□□□□□ -1.79
SGCEO43556 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC3.85□□□□□ -1.79
SGCEO43556 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.85□□□□□ -1.79
SGCEO43556 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC3.85□□□□□ -1.79
SGCEO43556 MIR4644-201ENST00000579929 84 ntBASIC3.85□□□□□ -1.79
SGCEO43556 AC093765.1-201ENST00000603758 881 ntBASIC3.85□□□□□ -1.79
SGCEO43556 AC115286.1-201ENST00000604298 434 ntBASIC3.85□□□□□ -1.79
SGCEO43556 AL096803.3-201ENST00000609032 532 ntBASIC3.85□□□□□ -1.79
SGCEO43556 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SGCEO43556 MIR6891-201ENST00000618788 93 ntBASIC3.85□□□□□ -1.79
SGCEO43556 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.85□□□□□ -1.79
SGCEO43556 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC3.85□□□□□ -1.79
SGCEO43556 CFTRP2-201ENST00000634304 199 ntBASIC3.85□□□□□ -1.79
SGCEO43556 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
SGCEO43556 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SGCEO43556 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.85□□□□□ -1.79
SGCEO43556 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.85□□□□□ -1.79
SGCEO43556 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.84□□□□□ -1.79
SGCEO43556 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.84□□□□□ -1.79
SGCEO43556 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SGCEO43556 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.84□□□□□ -1.79
SGCEO43556 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
SGCEO43556 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
SGCEO43556 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC3.84□□□□□ -1.79
SGCEO43556 RNA5SP505-201ENST00000364748 108 ntBASIC3.84□□□□□ -1.79
SGCEO43556 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.84□□□□□ -1.79
SGCEO43556 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
SGCEO43556 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.84□□□□□ -1.79
SGCEO43556 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC3.84□□□□□ -1.79
SGCEO43556 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC3.84□□□□□ -1.79
SGCEO43556 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 138.9 ms