Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.73□□□□□ -1.49
COL3A1P02461 AC093824.1-201ENST00000508796 343 ntBASIC5.73□□□□□ -1.49
COL3A1P02461 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC5.73□□□□□ -1.49
COL3A1P02461 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.73□□□□□ -1.49
COL3A1P02461 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC5.73□□□□□ -1.49
COL3A1P02461 AC105233.3-201ENST00000531125 744 ntBASIC5.73□□□□□ -1.49
COL3A1P02461 REXO2-218ENST00000544827 880 ntTSL 3 BASIC5.73□□□□□ -1.49
COL3A1P02461 AP000619.2-201ENST00000546014 969 ntBASIC5.73□□□□□ -1.49
COL3A1P02461 AC025884.1-201ENST00000556034 378 ntBASIC5.73□□□□□ -1.49
COL3A1P02461 AL049874.4-201ENST00000557593 255 ntBASIC5.73□□□□□ -1.49
COL3A1P02461 MTCYBP33-201ENST00000575007 1130 ntBASIC5.73□□□□□ -1.49
COL3A1P02461 RN7SL176P-201ENST00000580352 264 ntBASIC5.73□□□□□ -1.49
COL3A1P02461 AC011477.5-201ENST00000586571 259 ntBASIC5.73□□□□□ -1.49
COL3A1P02461 AC022022.2-201ENST00000602989 360 ntBASIC5.73□□□□□ -1.49
COL3A1P02461 AL121652.1-201ENST00000608851 448 ntBASIC5.73□□□□□ -1.49
COL3A1P02461 AC233968.1-201ENST00000611212 1300 ntBASIC5.73□□□□□ -1.49
COL3A1P02461 AC007998.4-201ENST00000612496 2533 ntBASIC5.73□□□□□ -1.49
COL3A1P02461 AC022306.2-201ENST00000617563 647 ntBASIC5.73□□□□□ -1.49
COL3A1P02461 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC5.73□□□□□ -1.49
COL3A1P02461 AL512506.2-201ENST00000624472 458 ntBASIC5.73□□□□□ -1.49
COL3A1P02461 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.73□□□□□ -1.49
COL3A1P02461 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
COL3A1P02461 MIR492-201ENST00000638676 116 ntBASIC5.73□□□□□ -1.49
COL3A1P02461 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
COL3A1P02461 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
COL3A1P02461 RNA5SP22-201ENST00000365393 109 ntBASIC5.72□□□□□ -1.49
COL3A1P02461 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
COL3A1P02461 MIR23A-201ENST00000385245 73 ntBASIC5.72□□□□□ -1.49
COL3A1P02461 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.72□□□□□ -1.49
COL3A1P02461 SNX10-203ENST00000409367 746 ntTSL 5 BASIC5.72□□□□□ -1.49
COL3A1P02461 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.72□□□□□ -1.49
COL3A1P02461 CYP4F29P-201ENST00000420685 446 ntBASIC5.72□□□□□ -1.49
COL3A1P02461 AC244033.1-201ENST00000426826 870 ntBASIC5.72□□□□□ -1.49
COL3A1P02461 MTCO1P57-201ENST00000432182 261 ntBASIC5.72□□□□□ -1.49
COL3A1P02461 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.72□□□□□ -1.49
COL3A1P02461 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.72□□□□□ -1.49
COL3A1P02461 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.72□□□□□ -1.49
COL3A1P02461 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
COL3A1P02461 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.72□□□□□ -1.49
COL3A1P02461 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
COL3A1P02461 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.72□□□□□ -1.49
COL3A1P02461 RNA5SP73-201ENST00000516744 108 ntBASIC5.72□□□□□ -1.49
COL3A1P02461 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC5.72□□□□□ -1.49
COL3A1P02461 ZKSCAN7P1-201ENST00000543668 673 ntBASIC5.72□□□□□ -1.49
COL3A1P02461 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.72□□□□□ -1.49
COL3A1P02461 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
COL3A1P02461 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
COL3A1P02461 AC234772.3-201ENST00000602277 528 ntBASIC5.72□□□□□ -1.49
COL3A1P02461 ARF4P1-201ENST00000605447 541 ntBASIC5.72□□□□□ -1.49
COL3A1P02461 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC5.72□□□□□ -1.49
COL3A1P02461 AL021997.2-201ENST00000615674 271 ntBASIC5.72□□□□□ -1.49
COL3A1P02461 AC126544.2-201ENST00000625174 749 ntBASIC5.72□□□□□ -1.49
COL3A1P02461 AC068724.3-201ENST00000625906 87 ntBASIC5.72□□□□□ -1.49
COL3A1P02461 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
COL3A1P02461 AP001157.1-201ENST00000550837 2339 ntBASIC5.72□□□□□ -1.49
COL3A1P02461 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
COL3A1P02461 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
COL3A1P02461 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
COL3A1P02461 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
COL3A1P02461 AC104260.2-201ENST00000623551 3497 ntBASIC5.72□□□□□ -1.49
COL3A1P02461 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
COL3A1P02461 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
COL3A1P02461 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
COL3A1P02461 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.72□□□□□ -1.49
COL3A1P02461 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
COL3A1P02461 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
COL3A1P02461 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
COL3A1P02461 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.49
COL3A1P02461 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
COL3A1P02461 RNU6-819P-201ENST00000364116 107 ntBASIC5.71□□□□□ -1.49
COL3A1P02461 AL049545.1-201ENST00000401856 572 ntBASIC5.71□□□□□ -1.49
COL3A1P02461 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
COL3A1P02461 HIGD1AP15-201ENST00000416198 280 ntBASIC5.71□□□□□ -1.49
COL3A1P02461 XKRYP1-201ENST00000423438 492 ntBASIC5.71□□□□□ -1.49
COL3A1P02461 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC5.71□□□□□ -1.49
COL3A1P02461 XKRYP2-201ENST00000432915 492 ntBASIC5.71□□□□□ -1.49
COL3A1P02461 OR4C10P-201ENST00000434991 931 ntBASIC5.71□□□□□ -1.49
COL3A1P02461 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.71□□□□□ -1.49
COL3A1P02461 SETD6P1-201ENST00000444575 317 ntBASIC5.71□□□□□ -1.49
COL3A1P02461 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.71□□□□□ -1.49
COL3A1P02461 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC5.71□□□□□ -1.49
COL3A1P02461 MTCYBP35-201ENST00000503630 1137 ntBASIC5.71□□□□□ -1.49
COL3A1P02461 MTND4P2-201ENST00000507767 1203 ntBASIC5.71□□□□□ -1.49
COL3A1P02461 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC5.71□□□□□ -1.49
COL3A1P02461 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC5.71□□□□□ -1.49
COL3A1P02461 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC5.71□□□□□ -1.49
COL3A1P02461 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC5.71□□□□□ -1.49
COL3A1P02461 SNORA70.17-201ENST00000516449 133 ntBASIC5.71□□□□□ -1.49
COL3A1P02461 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC5.71□□□□□ -1.49
COL3A1P02461 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
COL3A1P02461 AL352979.3-201ENST00000553515 247 ntBASIC5.71□□□□□ -1.49
COL3A1P02461 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.71□□□□□ -1.49
COL3A1P02461 AC010547.7-201ENST00000570323 333 ntBASIC5.71□□□□□ -1.49
COL3A1P02461 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC5.71□□□□□ -1.49
COL3A1P02461 MTCO2P2-201ENST00000591258 225 ntBASIC5.71□□□□□ -1.49
COL3A1P02461 AC119751.7-201ENST00000600494 245 ntBASIC5.71□□□□□ -1.49
COL3A1P02461 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC5.71□□□□□ -1.49
COL3A1P02461 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
COL3A1P02461 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
COL3A1P02461 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms