Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC4.48□□□□□ -1.69
ZIC3O60481 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.48□□□□□ -1.69
ZIC3O60481 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.48□□□□□ -1.69
ZIC3O60481 AC116553.2-201ENST00000564203 463 ntBASIC4.48□□□□□ -1.69
ZIC3O60481 AC009094.1-201ENST00000564443 426 ntBASIC4.48□□□□□ -1.69
ZIC3O60481 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.48□□□□□ -1.69
ZIC3O60481 MIR3934-201ENST00000579806 107 ntBASIC4.48□□□□□ -1.69
ZIC3O60481 MIR4666A-201ENST00000580160 79 ntBASIC4.48□□□□□ -1.69
ZIC3O60481 AP001269.3-201ENST00000588718 329 ntBASIC4.48□□□□□ -1.69
ZIC3O60481 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.48□□□□□ -1.69
ZIC3O60481 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC4.48□□□□□ -1.69
ZIC3O60481 DUXAP3-201ENST00000603616 594 ntBASIC4.48□□□□□ -1.69
ZIC3O60481 AC005084.1-201ENST00000605160 304 ntBASIC4.48□□□□□ -1.69
ZIC3O60481 AP000238.1-201ENST00000608759 426 ntBASIC4.48□□□□□ -1.69
ZIC3O60481 AL592148.2-201ENST00000612210 372 ntBASIC4.48□□□□□ -1.69
ZIC3O60481 AC024257.5-201ENST00000612739 531 ntBASIC4.48□□□□□ -1.69
ZIC3O60481 AL049794.2-201ENST00000616301 365 ntBASIC4.48□□□□□ -1.69
ZIC3O60481 AC079416.3-201ENST00000624479 549 ntBASIC4.48□□□□□ -1.69
ZIC3O60481 AC092608.3-201ENST00000625017 386 ntBASIC4.48□□□□□ -1.69
ZIC3O60481 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.48□□□□□ -1.69
ZIC3O60481 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
ZIC3O60481 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
ZIC3O60481 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.48□□□□□ -1.69
ZIC3O60481 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
ZIC3O60481 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
ZIC3O60481 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
ZIC3O60481 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.48□□□□□ -1.69
ZIC3O60481 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.48□□□□□ -1.69
ZIC3O60481 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
ZIC3O60481 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
ZIC3O60481 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.48□□□□□ -1.69
ZIC3O60481 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.48□□□□□ -1.69
ZIC3O60481 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
ZIC3O60481 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
ZIC3O60481 MTND4P31-201ENST00000425607 1343 ntBASIC4.47□□□□□ -1.69
ZIC3O60481 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
ZIC3O60481 AC099654.2-201ENST00000433031 1980 ntBASIC4.47□□□□□ -1.69
ZIC3O60481 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.47□□□□□ -1.69
ZIC3O60481 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
ZIC3O60481 ADAM5-202ENST00000399789 1942 ntBASIC4.47□□□□□ -1.69
ZIC3O60481 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.47□□□□□ -1.69
ZIC3O60481 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.47□□□□□ -1.69
ZIC3O60481 SNORD116.1-201ENST00000365628 92 ntBASIC4.47□□□□□ -1.69
ZIC3O60481 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.47□□□□□ -1.69
ZIC3O60481 RNU6-317P-201ENST00000384031 107 ntBASIC4.47□□□□□ -1.69
ZIC3O60481 EI24P3-201ENST00000399046 1062 ntBASIC4.47□□□□□ -1.69
ZIC3O60481 AL133270.1-201ENST00000402635 279 ntBASIC4.47□□□□□ -1.69
ZIC3O60481 AL590290.1-201ENST00000405336 380 ntBASIC4.47□□□□□ -1.69
ZIC3O60481 SNORA11B-201ENST00000408175 129 ntBASIC4.47□□□□□ -1.69
ZIC3O60481 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.47□□□□□ -1.69
ZIC3O60481 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.47□□□□□ -1.69
ZIC3O60481 QRSL1P2-201ENST00000418582 964 ntBASIC4.47□□□□□ -1.69
ZIC3O60481 AC114814.2-201ENST00000419195 485 ntBASIC4.47□□□□□ -1.69
ZIC3O60481 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.47□□□□□ -1.69
ZIC3O60481 RPS6P15-201ENST00000431996 751 ntBASIC4.47□□□□□ -1.69
ZIC3O60481 RPL12P18-201ENST00000437175 325 ntBASIC4.47□□□□□ -1.69
ZIC3O60481 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.47□□□□□ -1.69
ZIC3O60481 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.47□□□□□ -1.69
ZIC3O60481 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC4.47□□□□□ -1.69
ZIC3O60481 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.47□□□□□ -1.69
ZIC3O60481 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.47□□□□□ -1.69
ZIC3O60481 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.47□□□□□ -1.69
ZIC3O60481 RPS3AP41-201ENST00000462701 778 ntBASIC4.47□□□□□ -1.69
ZIC3O60481 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.47□□□□□ -1.69
ZIC3O60481 PRDX3P4-201ENST00000470828 747 ntBASIC4.47□□□□□ -1.69
ZIC3O60481 AC091951.3-201ENST00000504093 246 ntBASIC4.47□□□□□ -1.69
ZIC3O60481 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.47□□□□□ -1.69
ZIC3O60481 AC034244.1-201ENST00000507687 207 ntBASIC4.47□□□□□ -1.69
ZIC3O60481 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.47□□□□□ -1.69
ZIC3O60481 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.47□□□□□ -1.69
ZIC3O60481 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.47□□□□□ -1.69
ZIC3O60481 PCNPP1-201ENST00000552501 511 ntBASIC4.47□□□□□ -1.69
ZIC3O60481 DUXAP6-201ENST00000553858 601 ntBASIC4.47□□□□□ -1.69
ZIC3O60481 AL359219.2-201ENST00000555184 348 ntBASIC4.47□□□□□ -1.69
ZIC3O60481 AC044913.1-201ENST00000557200 430 ntBASIC4.47□□□□□ -1.69
ZIC3O60481 NIFKP8-201ENST00000560500 874 ntBASIC4.47□□□□□ -1.69
ZIC3O60481 AC018552.1-201ENST00000562099 811 ntBASIC4.47□□□□□ -1.69
ZIC3O60481 MIR5708-201ENST00000579723 85 ntBASIC4.47□□□□□ -1.69
ZIC3O60481 AC005412.1-201ENST00000580812 1049 ntBASIC4.47□□□□□ -1.69
ZIC3O60481 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.47□□□□□ -1.69
ZIC3O60481 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC4.47□□□□□ -1.69
ZIC3O60481 AC011453.2-201ENST00000603737 729 ntBASIC4.47□□□□□ -1.69
ZIC3O60481 AC087783.2-201ENST00000605070 562 ntBASIC4.47□□□□□ -1.69
ZIC3O60481 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC4.47□□□□□ -1.69
ZIC3O60481 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.47□□□□□ -1.69
ZIC3O60481 AC006840.1-201ENST00000623069 542 ntBASIC4.47□□□□□ -1.69
ZIC3O60481 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.47□□□□□ -1.69
ZIC3O60481 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
ZIC3O60481 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.47□□□□□ -1.69
ZIC3O60481 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.47□□□□□ -1.69
ZIC3O60481 MFSD8-245ENST00000641743 948 ntBASIC4.47□□□□□ -1.69
ZIC3O60481 ZNF663P-202ENST00000641770 1131 ntBASIC4.47□□□□□ -1.69
ZIC3O60481 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
ZIC3O60481 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.47□□□□□ -1.69
ZIC3O60481 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.47□□□□□ -1.69
ZIC3O60481 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.47□□□□□ -1.69
ZIC3O60481 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
ZIC3O60481 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
ZIC3O60481 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
ZIC3O60481 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms