Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.38□□□□□ -1.71
PRKNO60260 MTND1P31-201ENST00000449206 961 ntBASIC4.38□□□□□ -1.71
PRKNO60260 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.38□□□□□ -1.71
PRKNO60260 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.38□□□□□ -1.71
PRKNO60260 AC092155.2-201ENST00000454675 477 ntBASIC4.38□□□□□ -1.71
PRKNO60260 CCNB1IP1P3-201ENST00000454702 829 ntBASIC4.38□□□□□ -1.71
PRKNO60260 GTF2IP12-201ENST00000456547 356 ntBASIC4.38□□□□□ -1.71
PRKNO60260 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC4.38□□□□□ -1.71
PRKNO60260 GYG1P1-201ENST00000460864 698 ntBASIC4.38□□□□□ -1.71
PRKNO60260 AC010326.1-201ENST00000462726 602 ntBASIC4.38□□□□□ -1.71
PRKNO60260 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.38□□□□□ -1.71
PRKNO60260 MTCO3P35-201ENST00000485582 781 ntBASIC4.38□□□□□ -1.71
PRKNO60260 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.38□□□□□ -1.71
PRKNO60260 AC026414.1-201ENST00000504046 698 ntBASIC4.38□□□□□ -1.71
PRKNO60260 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC4.38□□□□□ -1.71
PRKNO60260 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.38□□□□□ -1.71
PRKNO60260 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.38□□□□□ -1.71
PRKNO60260 OR5AN2P-201ENST00000534535 896 ntBASIC4.38□□□□□ -1.71
PRKNO60260 AC139103.1-201ENST00000534696 1030 ntBASIC4.38□□□□□ -1.71
PRKNO60260 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.38□□□□□ -1.71
PRKNO60260 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.38□□□□□ -1.71
PRKNO60260 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.38□□□□□ -1.71
PRKNO60260 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.38□□□□□ -1.71
PRKNO60260 AL109741.3-201ENST00000561748 592 ntBASIC4.38□□□□□ -1.71
PRKNO60260 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.38□□□□□ -1.71
PRKNO60260 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.38□□□□□ -1.71
PRKNO60260 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.38□□□□□ -1.71
PRKNO60260 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.38□□□□□ -1.71
PRKNO60260 AC022022.2-201ENST00000602989 360 ntBASIC4.38□□□□□ -1.71
PRKNO60260 AL135786.2-201ENST00000608422 615 ntBASIC4.38□□□□□ -1.71
PRKNO60260 AC079395.3-201ENST00000615161 484 ntBASIC4.38□□□□□ -1.71
PRKNO60260 AL356274.1-201ENST00000617064 410 ntBASIC4.38□□□□□ -1.71
PRKNO60260 AC104985.3-201ENST00000623479 597 ntBASIC4.38□□□□□ -1.71
PRKNO60260 AP000676.4-201ENST00000624659 623 ntBASIC4.38□□□□□ -1.71
PRKNO60260 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.38□□□□□ -1.71
PRKNO60260 AC139713.2-210ENST00000641741 992 ntBASIC4.38□□□□□ -1.71
PRKNO60260 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.38□□□□□ -1.71
PRKNO60260 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PRKNO60260 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PRKNO60260 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.38□□□□□ -1.71
PRKNO60260 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
PRKNO60260 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PRKNO60260 VN2R3P-201ENST00000422626 1412 ntBASIC4.38□□□□□ -1.71
PRKNO60260 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.37□□□□□ -1.71
PRKNO60260 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PRKNO60260 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PRKNO60260 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PRKNO60260 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.37□□□□□ -1.71
PRKNO60260 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PRKNO60260 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.37□□□□□ -1.71
PRKNO60260 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
PRKNO60260 RNA5SP27-201ENST00000363839 119 ntBASIC4.37□□□□□ -1.71
PRKNO60260 RNU6-532P-201ENST00000384318 107 ntBASIC4.37□□□□□ -1.71
PRKNO60260 MIR192-201ENST00000384915 110 ntBASIC4.37□□□□□ -1.71
PRKNO60260 AL590762.2-201ENST00000395798 571 ntBASIC4.37□□□□□ -1.71
PRKNO60260 MIR298-201ENST00000401212 88 ntBASIC4.37□□□□□ -1.71
PRKNO60260 AL049697.2-201ENST00000403708 294 ntBASIC4.37□□□□□ -1.71
PRKNO60260 RPL7P27-201ENST00000403775 720 ntBASIC4.37□□□□□ -1.71
PRKNO60260 RPL5P19-201ENST00000404228 893 ntBASIC4.37□□□□□ -1.71
PRKNO60260 AL034374.1-201ENST00000406329 351 ntBASIC4.37□□□□□ -1.71
PRKNO60260 AC092638.1-201ENST00000411966 1275 ntBASIC4.37□□□□□ -1.71
PRKNO60260 AL591848.1-201ENST00000413092 322 ntBASIC4.37□□□□□ -1.71
PRKNO60260 LIPT1P1-201ENST00000415870 1186 ntBASIC4.37□□□□□ -1.71
PRKNO60260 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.37□□□□□ -1.71
PRKNO60260 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.37□□□□□ -1.71
PRKNO60260 AC092634.2-201ENST00000428146 1010 ntBASIC4.37□□□□□ -1.71
PRKNO60260 USP9YP24-201ENST00000434374 697 ntBASIC4.37□□□□□ -1.71
PRKNO60260 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC4.37□□□□□ -1.71
PRKNO60260 HSFY3P-201ENST00000444242 1191 ntBASIC4.37□□□□□ -1.71
PRKNO60260 USP9YP17-201ENST00000444617 696 ntBASIC4.37□□□□□ -1.71
PRKNO60260 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
PRKNO60260 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.37□□□□□ -1.71
PRKNO60260 AC108463.1-201ENST00000450258 347 ntBASIC4.37□□□□□ -1.71
PRKNO60260 RHEBP2-201ENST00000450289 600 ntBASIC4.37□□□□□ -1.71
PRKNO60260 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.37□□□□□ -1.71
PRKNO60260 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.37□□□□□ -1.71
PRKNO60260 SNORD11.1-201ENST00000459482 85 ntBASIC4.37□□□□□ -1.71
PRKNO60260 RPL7AP10-201ENST00000481016 791 ntBASIC4.37□□□□□ -1.71
PRKNO60260 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.37□□□□□ -1.71
PRKNO60260 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.37□□□□□ -1.71
PRKNO60260 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.37□□□□□ -1.71
PRKNO60260 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.37□□□□□ -1.71
PRKNO60260 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.37□□□□□ -1.71
PRKNO60260 RNU6-311P-201ENST00000516224 102 ntBASIC4.37□□□□□ -1.71
PRKNO60260 IGKV1-32-201ENST00000519290 311 ntBASIC4.37□□□□□ -1.71
PRKNO60260 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.37□□□□□ -1.71
PRKNO60260 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.37□□□□□ -1.71
PRKNO60260 MTND2P38-201ENST00000522536 667 ntBASIC4.37□□□□□ -1.71
PRKNO60260 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.37□□□□□ -1.71
PRKNO60260 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC4.37□□□□□ -1.71
PRKNO60260 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC4.37□□□□□ -1.71
PRKNO60260 AC079075.1-201ENST00000559543 878 ntBASIC4.37□□□□□ -1.71
PRKNO60260 AC018552.1-201ENST00000562099 811 ntBASIC4.37□□□□□ -1.71
PRKNO60260 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.37□□□□□ -1.71
PRKNO60260 RN7SL652P-201ENST00000577769 300 ntBASIC4.37□□□□□ -1.71
PRKNO60260 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC4.37□□□□□ -1.71
PRKNO60260 RN7SL690P-201ENST00000582087 240 ntBASIC4.37□□□□□ -1.71
PRKNO60260 AC011374.2-201ENST00000607135 526 ntBASIC4.37□□□□□ -1.71
PRKNO60260 AC004908.3-201ENST00000610248 625 ntBASIC4.37□□□□□ -1.71
PRKNO60260 AC073569.3-201ENST00000619055 682 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms