Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.59□□□□□ -1.67
TM9SF3Q9HD45 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC4.59□□□□□ -1.67
TM9SF3Q9HD45 AL356387.2-201ENST00000422272 243 ntBASIC4.59□□□□□ -1.67
TM9SF3Q9HD45 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.59□□□□□ -1.67
TM9SF3Q9HD45 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.59□□□□□ -1.67
TM9SF3Q9HD45 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.59□□□□□ -1.67
TM9SF3Q9HD45 MTCYBP21-201ENST00000443300 1113 ntBASIC4.59□□□□□ -1.67
TM9SF3Q9HD45 AL353898.1-201ENST00000444055 238 ntBASIC4.59□□□□□ -1.67
TM9SF3Q9HD45 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.59□□□□□ -1.67
TM9SF3Q9HD45 AC005008.1-201ENST00000456151 612 ntBASIC4.59□□□□□ -1.67
TM9SF3Q9HD45 RPL21P126-201ENST00000470049 478 ntBASIC4.59□□□□□ -1.67
TM9SF3Q9HD45 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.59□□□□□ -1.67
TM9SF3Q9HD45 AC020898.1-201ENST00000474167 787 ntBASIC4.59□□□□□ -1.67
TM9SF3Q9HD45 S100A11P1-201ENST00000477525 312 ntBASIC4.59□□□□□ -1.67
TM9SF3Q9HD45 RPL23AP37-201ENST00000479658 549 ntBASIC4.59□□□□□ -1.67
TM9SF3Q9HD45 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
TM9SF3Q9HD45 ATG10-AS1-201ENST00000504846 648 ntBASIC4.59□□□□□ -1.67
TM9SF3Q9HD45 STMN1P2-201ENST00000508435 439 ntBASIC4.59□□□□□ -1.67
TM9SF3Q9HD45 AC067904.2-201ENST00000517322 1283 ntBASIC4.59□□□□□ -1.67
TM9SF3Q9HD45 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.59□□□□□ -1.67
TM9SF3Q9HD45 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.59□□□□□ -1.67
TM9SF3Q9HD45 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.59□□□□□ -1.67
TM9SF3Q9HD45 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
TM9SF3Q9HD45 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
TM9SF3Q9HD45 AC008083.2-201ENST00000546707 476 ntBASIC4.59□□□□□ -1.67
TM9SF3Q9HD45 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.59□□□□□ -1.67
TM9SF3Q9HD45 AL109766.1-201ENST00000555080 552 ntBASIC4.59□□□□□ -1.67
TM9SF3Q9HD45 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.59□□□□□ -1.67
TM9SF3Q9HD45 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.59□□□□□ -1.67
TM9SF3Q9HD45 AC069366.1-201ENST00000583159 838 ntBASIC4.59□□□□□ -1.67
TM9SF3Q9HD45 AC011477.5-201ENST00000586571 259 ntBASIC4.59□□□□□ -1.67
TM9SF3Q9HD45 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.59□□□□□ -1.67
TM9SF3Q9HD45 AC009303.3-201ENST00000591103 736 ntBASIC4.59□□□□□ -1.67
TM9SF3Q9HD45 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.59□□□□□ -1.67
TM9SF3Q9HD45 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.59□□□□□ -1.67
TM9SF3Q9HD45 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.59□□□□□ -1.67
TM9SF3Q9HD45 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.59□□□□□ -1.68
TM9SF3Q9HD45 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
TM9SF3Q9HD45 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.59□□□□□ -1.68
TM9SF3Q9HD45 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.59□□□□□ -1.68
TM9SF3Q9HD45 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
TM9SF3Q9HD45 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TM9SF3Q9HD45 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
TM9SF3Q9HD45 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.58□□□□□ -1.68
TM9SF3Q9HD45 SYT14P1-202ENST00000600441 1448 ntBASIC4.58□□□□□ -1.68
TM9SF3Q9HD45 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
TM9SF3Q9HD45 AL136164.3-201ENST00000624429 3978 ntBASIC4.58□□□□□ -1.68
TM9SF3Q9HD45 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TM9SF3Q9HD45 OR4K17-201ENST00000315543 1032 ntBASIC4.58□□□□□ -1.68
TM9SF3Q9HD45 Y_RNA.126-201ENST00000363382 111 ntBASIC4.58□□□□□ -1.68
TM9SF3Q9HD45 RNA5SP28-201ENST00000363841 119 ntBASIC4.58□□□□□ -1.68
TM9SF3Q9HD45 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TM9SF3Q9HD45 RPL23AP59-201ENST00000399415 461 ntBASIC4.58□□□□□ -1.68
TM9SF3Q9HD45 AL121834.1-202ENST00000404494 277 ntBASIC4.58□□□□□ -1.68
TM9SF3Q9HD45 AL139039.2-201ENST00000407436 479 ntBASIC4.58□□□□□ -1.68
TM9SF3Q9HD45 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TM9SF3Q9HD45 RPL26P37-201ENST00000411983 438 ntBASIC4.58□□□□□ -1.68
TM9SF3Q9HD45 RPL21P108-201ENST00000413857 481 ntBASIC4.58□□□□□ -1.68
TM9SF3Q9HD45 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.58□□□□□ -1.68
TM9SF3Q9HD45 RPS12P5-201ENST00000423449 371 ntBASIC4.58□□□□□ -1.68
TM9SF3Q9HD45 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.58□□□□□ -1.68
TM9SF3Q9HD45 AL157827.1-201ENST00000447622 132 ntBASIC4.58□□□□□ -1.68
TM9SF3Q9HD45 AC006511.1-201ENST00000470614 315 ntBASIC4.58□□□□□ -1.68
TM9SF3Q9HD45 AC025164.1-201ENST00000496249 478 ntBASIC4.58□□□□□ -1.68
TM9SF3Q9HD45 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
TM9SF3Q9HD45 AC022790.1-201ENST00000522872 204 ntBASIC4.58□□□□□ -1.68
TM9SF3Q9HD45 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.58□□□□□ -1.68
TM9SF3Q9HD45 FKBP1BP1-201ENST00000553366 325 ntBASIC4.58□□□□□ -1.68
TM9SF3Q9HD45 GLRXP2-201ENST00000555594 321 ntBASIC4.58□□□□□ -1.68
TM9SF3Q9HD45 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TM9SF3Q9HD45 MIR4458-201ENST00000578872 75 ntBASIC4.58□□□□□ -1.68
TM9SF3Q9HD45 MIR3138-201ENST00000585238 82 ntBASIC4.58□□□□□ -1.68
TM9SF3Q9HD45 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.58□□□□□ -1.68
TM9SF3Q9HD45 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.58□□□□□ -1.68
TM9SF3Q9HD45 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.58□□□□□ -1.68
TM9SF3Q9HD45 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TM9SF3Q9HD45 AC009237.17-201ENST00000618111 748 ntBASIC4.58□□□□□ -1.68
TM9SF3Q9HD45 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TM9SF3Q9HD45 AC011815.3-201ENST00000624194 473 ntBASIC4.58□□□□□ -1.68
TM9SF3Q9HD45 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
TM9SF3Q9HD45 AL672167.1-205ENST00000641112 3080 ntBASIC4.58□□□□□ -1.68
TM9SF3Q9HD45 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TM9SF3Q9HD45 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TM9SF3Q9HD45 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
TM9SF3Q9HD45 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TM9SF3Q9HD45 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.57□□□□□ -1.68
TM9SF3Q9HD45 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.57□□□□□ -1.68
TM9SF3Q9HD45 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TM9SF3Q9HD45 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TM9SF3Q9HD45 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
TM9SF3Q9HD45 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.57□□□□□ -1.68
TM9SF3Q9HD45 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.57□□□□□ -1.68
TM9SF3Q9HD45 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
TM9SF3Q9HD45 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
TM9SF3Q9HD45 MIR659-201ENST00000384963 97 ntBASIC4.57□□□□□ -1.68
TM9SF3Q9HD45 AC013404.1-201ENST00000413068 249 ntBASIC4.57□□□□□ -1.68
TM9SF3Q9HD45 AC009237.10-201ENST00000414112 510 ntBASIC4.57□□□□□ -1.68
TM9SF3Q9HD45 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TM9SF3Q9HD45 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TM9SF3Q9HD45 VN1R37P-201ENST00000419096 748 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms