Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 RNA5SP123-201ENST00000363244 119 ntBASIC5.35□□□□□ -1.55
SMOQ99835 RNA5SP428-201ENST00000365129 132 ntBASIC5.35□□□□□ -1.55
SMOQ99835 MIR320B1-201ENST00000390209 79 ntBASIC5.35□□□□□ -1.55
SMOQ99835 AC093719.1-202ENST00000392735 373 ntBASIC5.35□□□□□ -1.55
SMOQ99835 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC5.35□□□□□ -1.55
SMOQ99835 RNU6-575P-201ENST00000411326 105 ntBASIC5.35□□□□□ -1.55
SMOQ99835 SETP15-201ENST00000412724 337 ntBASIC5.35□□□□□ -1.55
SMOQ99835 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.35□□□□□ -1.55
SMOQ99835 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC5.35□□□□□ -1.55
SMOQ99835 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SMOQ99835 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.35□□□□□ -1.55
SMOQ99835 AC006960.1-201ENST00000419980 153 ntBASIC5.35□□□□□ -1.55
SMOQ99835 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC5.35□□□□□ -1.55
SMOQ99835 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.35□□□□□ -1.55
SMOQ99835 MTND1P20-201ENST00000430341 950 ntBASIC5.35□□□□□ -1.55
SMOQ99835 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC5.35□□□□□ -1.55
SMOQ99835 MTCO3P5-201ENST00000433620 714 ntBASIC5.35□□□□□ -1.55
SMOQ99835 HMGB3P10-201ENST00000434734 572 ntBASIC5.35□□□□□ -1.55
SMOQ99835 RPL12P3-201ENST00000440080 396 ntBASIC5.35□□□□□ -1.55
SMOQ99835 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC5.35□□□□□ -1.55
SMOQ99835 MTCO2P7-201ENST00000446518 666 ntBASIC5.35□□□□□ -1.55
SMOQ99835 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.35□□□□□ -1.55
SMOQ99835 IGHV5-78-201ENST00000450948 295 ntBASIC5.35□□□□□ -1.55
SMOQ99835 OR52E3P-201ENST00000452083 936 ntBASIC5.35□□□□□ -1.55
SMOQ99835 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.35□□□□□ -1.55
SMOQ99835 RN7SL610P-201ENST00000463845 291 ntBASIC5.35□□□□□ -1.55
SMOQ99835 AC037198.2-201ENST00000478845 733 ntBASIC5.35□□□□□ -1.55
SMOQ99835 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC5.35□□□□□ -1.55
SMOQ99835 MTCYBP16-201ENST00000509187 1129 ntBASIC5.35□□□□□ -1.55
SMOQ99835 RNA5SP43-201ENST00000516559 110 ntBASIC5.35□□□□□ -1.55
SMOQ99835 RNU6-759P-201ENST00000516740 103 ntBASIC5.35□□□□□ -1.55
SMOQ99835 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.35□□□□□ -1.55
SMOQ99835 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC5.35□□□□□ -1.55
SMOQ99835 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.35□□□□□ -1.55
SMOQ99835 AC124293.1-201ENST00000530034 493 ntBASIC5.35□□□□□ -1.55
SMOQ99835 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC5.35□□□□□ -1.55
SMOQ99835 ELOCP32-201ENST00000548625 324 ntBASIC5.35□□□□□ -1.55
SMOQ99835 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.35□□□□□ -1.55
SMOQ99835 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.35□□□□□ -1.55
SMOQ99835 NIFKP8-201ENST00000560500 874 ntBASIC5.35□□□□□ -1.55
SMOQ99835 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC5.35□□□□□ -1.55
SMOQ99835 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC5.35□□□□□ -1.55
SMOQ99835 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC5.35□□□□□ -1.55
SMOQ99835 OR1F2P-201ENST00000570470 933 ntBASIC5.35□□□□□ -1.55
SMOQ99835 MIR3912-201ENST00000577566 105 ntBASIC5.35□□□□□ -1.55
SMOQ99835 MIR4646-201ENST00000580775 63 ntBASIC5.35□□□□□ -1.55
SMOQ99835 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC5.35□□□□□ -1.55
SMOQ99835 AC022069.1-201ENST00000582910 658 ntBASIC5.35□□□□□ -1.55
SMOQ99835 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.35□□□□□ -1.55
SMOQ99835 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.35□□□□□ -1.55
SMOQ99835 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.35□□□□□ -1.55
SMOQ99835 AL031281.1-201ENST00000604049 488 ntBASIC5.35□□□□□ -1.55
SMOQ99835 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.35□□□□□ -1.55
SMOQ99835 AL354976.1-201ENST00000613843 387 ntBASIC5.35□□□□□ -1.55
SMOQ99835 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.35□□□□□ -1.55
SMOQ99835 AC021106.3-201ENST00000623925 531 ntBASIC5.35□□□□□ -1.55
SMOQ99835 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
SMOQ99835 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.35□□□□□ -1.55
SMOQ99835 AC087821.2-201ENST00000637086 450 ntBASIC5.35□□□□□ -1.55
SMOQ99835 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
SMOQ99835 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SMOQ99835 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SMOQ99835 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
SMOQ99835 AC109446.4-201ENST00000623235 2755 ntBASIC5.35□□□□□ -1.55
SMOQ99835 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SMOQ99835 AC107021.2-201ENST00000567714 2095 ntBASIC5.35□□□□□ -1.55
SMOQ99835 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
SMOQ99835 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.34□□□□□ -1.55
SMOQ99835 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
SMOQ99835 AL450345.1-202ENST00000605741 3881 ntBASIC5.34□□□□□ -1.55
SMOQ99835 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SMOQ99835 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.34□□□□□ -1.55
SMOQ99835 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.34□□□□□ -1.55
SMOQ99835 SNORA66-201ENST00000384792 133 ntBASIC5.34□□□□□ -1.55
SMOQ99835 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SMOQ99835 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
SMOQ99835 AL035079.1-201ENST00000405210 287 ntBASIC5.34□□□□□ -1.55
SMOQ99835 SNORA77-201ENST00000408716 125 ntBASIC5.34□□□□□ -1.55
SMOQ99835 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC5.34□□□□□ -1.55
SMOQ99835 BTF3L4P1-201ENST00000413813 468 ntBASIC5.34□□□□□ -1.55
SMOQ99835 AC234781.4-201ENST00000419384 244 ntBASIC5.34□□□□□ -1.55
SMOQ99835 AL590762.4-201ENST00000425885 253 ntBASIC5.34□□□□□ -1.55
SMOQ99835 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SMOQ99835 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC5.34□□□□□ -1.55
SMOQ99835 FTLP19-201ENST00000433300 394 ntBASIC5.34□□□□□ -1.55
SMOQ99835 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.34□□□□□ -1.55
SMOQ99835 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.34□□□□□ -1.55
SMOQ99835 RPL23AP76-201ENST00000441860 458 ntBASIC5.34□□□□□ -1.55
SMOQ99835 TCEA1P1-201ENST00000449716 880 ntBASIC5.34□□□□□ -1.55
SMOQ99835 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC5.34□□□□□ -1.55
SMOQ99835 RPL31P3-201ENST00000458430 332 ntBASIC5.34□□□□□ -1.55
SMOQ99835 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC5.34□□□□□ -1.55
SMOQ99835 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC5.34□□□□□ -1.55
SMOQ99835 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC5.34□□□□□ -1.55
SMOQ99835 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SMOQ99835 AC021146.8-201ENST00000507455 733 ntBASIC5.34□□□□□ -1.55
SMOQ99835 XKRY-201ENST00000510392 1100 ntBASIC5.34□□□□□ -1.55
SMOQ99835 AC093755.1-201ENST00000512950 1023 ntBASIC5.34□□□□□ -1.55
SMOQ99835 AC008837.2-201ENST00000513076 418 ntBASIC5.34□□□□□ -1.55
SMOQ99835 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms