Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 RNA5SP234-201ENST00000363916 119 ntBASIC5.25□□□□□ -1.57
PHGDHO43175 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
PHGDHO43175 ATP5F1P3-201ENST00000397213 657 ntBASIC5.25□□□□□ -1.57
PHGDHO43175 RPL21P67-201ENST00000402896 478 ntBASIC5.25□□□□□ -1.57
PHGDHO43175 RNU4-72P-201ENST00000410754 173 ntBASIC5.25□□□□□ -1.57
PHGDHO43175 AC002524.1-201ENST00000411687 547 ntBASIC5.25□□□□□ -1.57
PHGDHO43175 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.25□□□□□ -1.57
PHGDHO43175 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.25□□□□□ -1.57
PHGDHO43175 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.25□□□□□ -1.57
PHGDHO43175 USP9YP26-201ENST00000421008 661 ntBASIC5.25□□□□□ -1.57
PHGDHO43175 MTND4P20-201ENST00000424125 869 ntBASIC5.25□□□□□ -1.57
PHGDHO43175 RPL12P11-201ENST00000439970 501 ntBASIC5.25□□□□□ -1.57
PHGDHO43175 MTND5P2-201ENST00000442927 1142 ntBASIC5.25□□□□□ -1.57
PHGDHO43175 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC5.25□□□□□ -1.57
PHGDHO43175 RPL23AP15-201ENST00000450202 459 ntBASIC5.25□□□□□ -1.57
PHGDHO43175 AL109741.2-201ENST00000455561 343 ntBASIC5.25□□□□□ -1.57
PHGDHO43175 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC5.25□□□□□ -1.57
PHGDHO43175 AC084754.1-201ENST00000463466 464 ntBASIC5.25□□□□□ -1.57
PHGDHO43175 AC104689.1-201ENST00000473356 768 ntBASIC5.25□□□□□ -1.57
PHGDHO43175 UBA52P3-201ENST00000491303 382 ntBASIC5.25□□□□□ -1.57
PHGDHO43175 AC090638.1-201ENST00000498296 909 ntBASIC5.25□□□□□ -1.57
PHGDHO43175 AC104090.1-201ENST00000506341 1171 ntBASIC5.25□□□□□ -1.57
PHGDHO43175 AC010587.2-201ENST00000511727 448 ntBASIC5.25□□□□□ -1.57
PHGDHO43175 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC5.25□□□□□ -1.57
PHGDHO43175 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.25□□□□□ -1.57
PHGDHO43175 AC022360.1-201ENST00000521058 340 ntBASIC5.25□□□□□ -1.57
PHGDHO43175 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC5.25□□□□□ -1.57
PHGDHO43175 AC112191.2-201ENST00000522428 333 ntBASIC5.25□□□□□ -1.57
PHGDHO43175 AP001189.2-201ENST00000527320 189 ntBASIC5.25□□□□□ -1.57
PHGDHO43175 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.25□□□□□ -1.57
PHGDHO43175 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5.25□□□□□ -1.57
PHGDHO43175 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC5.25□□□□□ -1.57
PHGDHO43175 AC109446.2-201ENST00000567872 497 ntBASIC5.25□□□□□ -1.57
PHGDHO43175 AC002400.1-201ENST00000569310 726 ntBASIC5.25□□□□□ -1.57
PHGDHO43175 AC127024.5-201ENST00000580085 462 ntBASIC5.25□□□□□ -1.57
PHGDHO43175 MIR1273E-201ENST00000581165 102 ntBASIC5.25□□□□□ -1.57
PHGDHO43175 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.25□□□□□ -1.57
PHGDHO43175 VN1R82P-201ENST00000601481 356 ntBASIC5.25□□□□□ -1.57
PHGDHO43175 AL121890.2-201ENST00000617644 465 ntBASIC5.25□□□□□ -1.57
PHGDHO43175 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PHGDHO43175 AL603755.1-201ENST00000619504 163 ntBASIC5.25□□□□□ -1.57
PHGDHO43175 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PHGDHO43175 AC104623.2-202ENST00000623477 4002 ntBASIC5.25□□□□□ -1.57
PHGDHO43175 AP000756.2-201ENST00000624168 2567 ntBASIC5.25□□□□□ -1.57
PHGDHO43175 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
PHGDHO43175 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.25□□□□□ -1.57
PHGDHO43175 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PHGDHO43175 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PHGDHO43175 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PHGDHO43175 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
PHGDHO43175 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
PHGDHO43175 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PHGDHO43175 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PHGDHO43175 AC023421.1-201ENST00000590535 1785 ntBASIC5.24□□□□□ -1.57
PHGDHO43175 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PHGDHO43175 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.24□□□□□ -1.57
PHGDHO43175 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
PHGDHO43175 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
PHGDHO43175 AC027228.2-201ENST00000567141 2154 ntBASIC5.24□□□□□ -1.57
PHGDHO43175 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
PHGDHO43175 THAP12P5-201ENST00000405864 2275 ntBASIC5.24□□□□□ -1.57
PHGDHO43175 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PHGDHO43175 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PHGDHO43175 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
PHGDHO43175 IL6STP1-201ENST00000346911 1020 ntBASIC5.24□□□□□ -1.57
PHGDHO43175 RNU5D-1-201ENST00000363299 116 ntBASIC5.24□□□□□ -1.57
PHGDHO43175 RN7SKP153-201ENST00000365026 316 ntBASIC5.24□□□□□ -1.57
PHGDHO43175 SNORD116-23-201ENST00000384645 92 ntBASIC5.24□□□□□ -1.57
PHGDHO43175 HSPA8P15-201ENST00000401676 786 ntBASIC5.24□□□□□ -1.57
PHGDHO43175 AGR3-202ENST00000402239 563 ntTSL 2 BASIC5.24□□□□□ -1.57
PHGDHO43175 RPL23AP47-201ENST00000408017 460 ntBASIC5.24□□□□□ -1.57
PHGDHO43175 TEX41-202ENST00000414256 604 ntTSL 5 BASIC5.24□□□□□ -1.57
PHGDHO43175 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.24□□□□□ -1.57
PHGDHO43175 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC5.24□□□□□ -1.57
PHGDHO43175 AC007394.1-201ENST00000421941 531 ntBASIC5.24□□□□□ -1.57
PHGDHO43175 AC099336.2-201ENST00000422457 254 ntBASIC5.24□□□□□ -1.57
PHGDHO43175 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.24□□□□□ -1.57
PHGDHO43175 AC234781.2-201ENST00000426370 994 ntBASIC5.24□□□□□ -1.57
PHGDHO43175 MTND6P12-201ENST00000428247 522 ntBASIC5.24□□□□□ -1.57
PHGDHO43175 UBE2D3P1-201ENST00000436669 444 ntBASIC5.24□□□□□ -1.57
PHGDHO43175 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.24□□□□□ -1.57
PHGDHO43175 AL354941.1-201ENST00000438600 464 ntBASIC5.24□□□□□ -1.57
PHGDHO43175 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC5.24□□□□□ -1.57
PHGDHO43175 RAB11AP1-201ENST00000442978 646 ntBASIC5.24□□□□□ -1.57
PHGDHO43175 GAPDHP25-201ENST00000447061 1001 ntBASIC5.24□□□□□ -1.57
PHGDHO43175 FAR2P1-206ENST00000449736 709 ntBASIC5.24□□□□□ -1.57
PHGDHO43175 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.24□□□□□ -1.57
PHGDHO43175 AC099560.2-201ENST00000457554 255 ntBASIC5.24□□□□□ -1.57
PHGDHO43175 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC5.24□□□□□ -1.57
PHGDHO43175 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.24□□□□□ -1.57
PHGDHO43175 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC5.24□□□□□ -1.57
PHGDHO43175 RNU6-513P-201ENST00000516104 104 ntBASIC5.24□□□□□ -1.57
PHGDHO43175 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PHGDHO43175 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.24□□□□□ -1.57
PHGDHO43175 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.24□□□□□ -1.57
PHGDHO43175 AC087373.1-201ENST00000524920 491 ntBASIC5.24□□□□□ -1.57
PHGDHO43175 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.24□□□□□ -1.57
PHGDHO43175 AC068993.1-201ENST00000546724 589 ntBASIC5.24□□□□□ -1.57
PHGDHO43175 BLZF2P-201ENST00000553776 1130 ntBASIC5.24□□□□□ -1.57
PHGDHO43175 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms