Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.11□□□□□ -1.75
COL21A1Q96P44 AL451050.1-201ENST00000450126 415 ntBASIC4.11□□□□□ -1.75
COL21A1Q96P44 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.11□□□□□ -1.75
COL21A1Q96P44 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.11□□□□□ -1.75
COL21A1Q96P44 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.11□□□□□ -1.75
COL21A1Q96P44 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.11□□□□□ -1.75
COL21A1Q96P44 AC079804.1-201ENST00000461922 436 ntBASIC4.11□□□□□ -1.75
COL21A1Q96P44 AC096741.1-201ENST00000472250 846 ntBASIC4.11□□□□□ -1.75
COL21A1Q96P44 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.11□□□□□ -1.75
COL21A1Q96P44 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.11□□□□□ -1.75
COL21A1Q96P44 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
COL21A1Q96P44 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.11□□□□□ -1.75
COL21A1Q96P44 RPL23AP97-201ENST00000568955 471 ntBASIC4.11□□□□□ -1.75
COL21A1Q96P44 AC027281.1-201ENST00000574178 758 ntBASIC4.11□□□□□ -1.75
COL21A1Q96P44 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.11□□□□□ -1.75
COL21A1Q96P44 AP001160.4-201ENST00000596971 382 ntBASIC4.11□□□□□ -1.75
COL21A1Q96P44 AC096553.1-201ENST00000605169 829 ntBASIC4.11□□□□□ -1.75
COL21A1Q96P44 AC012409.3-201ENST00000611343 981 ntBASIC4.11□□□□□ -1.75
COL21A1Q96P44 AC026368.1-201ENST00000614934 690 ntBASIC4.11□□□□□ -1.75
COL21A1Q96P44 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
COL21A1Q96P44 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
COL21A1Q96P44 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.11□□□□□ -1.75
COL21A1Q96P44 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
COL21A1Q96P44 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.11□□□□□ -1.75
COL21A1Q96P44 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
COL21A1Q96P44 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
COL21A1Q96P44 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
COL21A1Q96P44 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
COL21A1Q96P44 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
COL21A1Q96P44 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
COL21A1Q96P44 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.1□□□□□ -1.75
COL21A1Q96P44 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.1□□□□□ -1.75
COL21A1Q96P44 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
COL21A1Q96P44 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.1□□□□□ -1.75
COL21A1Q96P44 MIR23A-201ENST00000385245 73 ntBASIC4.1□□□□□ -1.75
COL21A1Q96P44 RNA5SP39-201ENST00000411245 120 ntBASIC4.1□□□□□ -1.75
COL21A1Q96P44 FAR2P2-201ENST00000413041 594 ntBASIC4.1□□□□□ -1.75
COL21A1Q96P44 RPS23P10-201ENST00000416185 486 ntBASIC4.1□□□□□ -1.75
COL21A1Q96P44 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.1□□□□□ -1.75
COL21A1Q96P44 AC013470.3-201ENST00000420252 1194 ntBASIC4.1□□□□□ -1.75
COL21A1Q96P44 AL356387.2-201ENST00000422272 243 ntBASIC4.1□□□□□ -1.75
COL21A1Q96P44 FAR2P4-202ENST00000425399 584 ntBASIC4.1□□□□□ -1.75
COL21A1Q96P44 DNAJC19P7-201ENST00000428811 344 ntBASIC4.1□□□□□ -1.75
COL21A1Q96P44 PRELID3BP10-201ENST00000431957 584 ntBASIC4.1□□□□□ -1.75
COL21A1Q96P44 AC011998.1-201ENST00000433403 117 ntBASIC4.1□□□□□ -1.75
COL21A1Q96P44 UBE2V1P3-201ENST00000439651 417 ntBASIC4.1□□□□□ -1.75
COL21A1Q96P44 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.1□□□□□ -1.75
COL21A1Q96P44 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.1□□□□□ -1.75
COL21A1Q96P44 CCRL1P1-201ENST00000449542 1053 ntBASIC4.1□□□□□ -1.75
COL21A1Q96P44 AC104306.1-201ENST00000449702 371 ntBASIC4.1□□□□□ -1.75
COL21A1Q96P44 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.1□□□□□ -1.75
COL21A1Q96P44 AL121877.1-201ENST00000453704 622 ntBASIC4.1□□□□□ -1.75
COL21A1Q96P44 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.1□□□□□ -1.75
COL21A1Q96P44 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.1□□□□□ -1.75
COL21A1Q96P44 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
COL21A1Q96P44 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.1□□□□□ -1.75
COL21A1Q96P44 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.1□□□□□ -1.75
COL21A1Q96P44 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.1□□□□□ -1.75
COL21A1Q96P44 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.1□□□□□ -1.75
COL21A1Q96P44 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.1□□□□□ -1.75
COL21A1Q96P44 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.1□□□□□ -1.75
COL21A1Q96P44 UBTFL9-201ENST00000534504 1148 ntBASIC4.1□□□□□ -1.75
COL21A1Q96P44 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.1□□□□□ -1.75
COL21A1Q96P44 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.1□□□□□ -1.75
COL21A1Q96P44 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
COL21A1Q96P44 AC138473.1-201ENST00000605717 526 ntBASIC4.1□□□□□ -1.75
COL21A1Q96P44 AC012213.4-201ENST00000606457 354 ntBASIC4.1□□□□□ -1.75
COL21A1Q96P44 AC009704.2-201ENST00000618739 483 ntBASIC4.1□□□□□ -1.75
COL21A1Q96P44 RMST_9.1-201ENST00000619945 193 ntBASIC4.1□□□□□ -1.75
COL21A1Q96P44 MIR4727-201ENST00000622232 55 ntBASIC4.1□□□□□ -1.75
COL21A1Q96P44 HSPA8P17-201ENST00000427029 1382 ntBASIC4.1□□□□□ -1.75
COL21A1Q96P44 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
COL21A1Q96P44 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
COL21A1Q96P44 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
COL21A1Q96P44 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
COL21A1Q96P44 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.1□□□□□ -1.75
COL21A1Q96P44 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
COL21A1Q96P44 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.1□□□□□ -1.75
COL21A1Q96P44 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
COL21A1Q96P44 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
COL21A1Q96P44 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
COL21A1Q96P44 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.09□□□□□ -1.75
COL21A1Q96P44 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.09□□□□□ -1.75
COL21A1Q96P44 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.09□□□□□ -1.75
COL21A1Q96P44 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
COL21A1Q96P44 RNA5SP513-201ENST00000364648 118 ntBASIC4.09□□□□□ -1.75
COL21A1Q96P44 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.09□□□□□ -1.75
COL21A1Q96P44 SNORD65-201ENST00000391079 73 ntBASIC4.09□□□□□ -1.75
COL21A1Q96P44 MIR1911-201ENST00000410783 80 ntBASIC4.09□□□□□ -1.75
COL21A1Q96P44 SNRPFP1-201ENST00000414761 252 ntBASIC4.09□□□□□ -1.75
COL21A1Q96P44 RPS27AP7-201ENST00000422792 455 ntBASIC4.09□□□□□ -1.75
COL21A1Q96P44 AC009480.2-201ENST00000422916 432 ntBASIC4.09□□□□□ -1.75
COL21A1Q96P44 IPMKP1-201ENST00000425988 855 ntBASIC4.09□□□□□ -1.75
COL21A1Q96P44 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.09□□□□□ -1.75
COL21A1Q96P44 RPL23AP4-201ENST00000427757 463 ntBASIC4.09□□□□□ -1.75
COL21A1Q96P44 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.09□□□□□ -1.75
COL21A1Q96P44 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.09□□□□□ -1.75
COL21A1Q96P44 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.09□□□□□ -1.75
COL21A1Q96P44 AP000936.3-201ENST00000438127 255 ntBASIC4.09□□□□□ -1.75
COL21A1Q96P44 ELOCP8-201ENST00000439309 332 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms