Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC6.22□□□□□ -1.41
SMC1BQ8NDV3 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC6.22□□□□□ -1.41
SMC1BQ8NDV3 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC6.22□□□□□ -1.41
SMC1BQ8NDV3 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC6.22□□□□□ -1.41
SMC1BQ8NDV3 AL354943.1-201ENST00000572103 781 ntBASIC6.22□□□□□ -1.41
SMC1BQ8NDV3 AC022662.1-201ENST00000580252 331 ntBASIC6.22□□□□□ -1.41
SMC1BQ8NDV3 RN7SL690P-201ENST00000582087 240 ntBASIC6.22□□□□□ -1.41
SMC1BQ8NDV3 KPNA2P3-201ENST00000584190 848 ntBASIC6.22□□□□□ -1.41
SMC1BQ8NDV3 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.22□□□□□ -1.41
SMC1BQ8NDV3 AC124856.1-201ENST00000600819 896 ntBASIC6.22□□□□□ -1.41
SMC1BQ8NDV3 AL133507.1-201ENST00000605269 557 ntBASIC6.22□□□□□ -1.41
SMC1BQ8NDV3 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC6.22□□□□□ -1.41
SMC1BQ8NDV3 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
SMC1BQ8NDV3 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
SMC1BQ8NDV3 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SMC1BQ8NDV3 CCT8P1-201ENST00000413611 1657 ntBASIC6.22□□□□□ -1.41
SMC1BQ8NDV3 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC6.22□□□□□ -1.41
SMC1BQ8NDV3 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC6.22□□□□□ -1.41
SMC1BQ8NDV3 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SMC1BQ8NDV3 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
SMC1BQ8NDV3 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
SMC1BQ8NDV3 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
SMC1BQ8NDV3 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
SMC1BQ8NDV3 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
SMC1BQ8NDV3 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.21□□□□□ -1.41
SMC1BQ8NDV3 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
SMC1BQ8NDV3 AC097063.1-201ENST00000426714 1797 ntBASIC6.21□□□□□ -1.41
SMC1BQ8NDV3 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
SMC1BQ8NDV3 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.21□□□□□ -1.41
SMC1BQ8NDV3 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC6.21□□□□□ -1.41
SMC1BQ8NDV3 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SMC1BQ8NDV3 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SMC1BQ8NDV3 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
SMC1BQ8NDV3 OR5H2-201ENST00000355273 945 ntBASIC6.21□□□□□ -1.42
SMC1BQ8NDV3 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
SMC1BQ8NDV3 NACA3P-201ENST00000359690 648 ntBASIC6.21□□□□□ -1.42
SMC1BQ8NDV3 MIR320B1-201ENST00000390209 79 ntBASIC6.21□□□□□ -1.42
SMC1BQ8NDV3 SFR1P1-201ENST00000403720 688 ntBASIC6.21□□□□□ -1.42
SMC1BQ8NDV3 AL136131.1-201ENST00000406079 803 ntBASIC6.21□□□□□ -1.42
SMC1BQ8NDV3 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC6.21□□□□□ -1.42
SMC1BQ8NDV3 UBE2V1P1-201ENST00000430836 445 ntBASIC6.21□□□□□ -1.42
SMC1BQ8NDV3 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC6.21□□□□□ -1.42
SMC1BQ8NDV3 RPL7P29-201ENST00000437151 728 ntBASIC6.21□□□□□ -1.42
SMC1BQ8NDV3 ARL5AP2-201ENST00000444698 533 ntBASIC6.21□□□□□ -1.42
SMC1BQ8NDV3 Z95327.1-201ENST00000446082 482 ntBASIC6.21□□□□□ -1.42
SMC1BQ8NDV3 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC6.21□□□□□ -1.42
SMC1BQ8NDV3 AC007327.1-201ENST00000447461 264 ntBASIC6.21□□□□□ -1.42
SMC1BQ8NDV3 ART2BP-201ENST00000453501 499 ntBASIC6.21□□□□□ -1.42
SMC1BQ8NDV3 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC6.21□□□□□ -1.42
SMC1BQ8NDV3 AC091959.2-201ENST00000477363 321 ntBASIC6.21□□□□□ -1.42
SMC1BQ8NDV3 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SMC1BQ8NDV3 RPSAP51-201ENST00000497462 645 ntBASIC6.21□□□□□ -1.42
SMC1BQ8NDV3 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC6.21□□□□□ -1.42
SMC1BQ8NDV3 FGB-207ENST00000509493 1164 ntTSL 5 BASIC6.21□□□□□ -1.42
SMC1BQ8NDV3 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC6.21□□□□□ -1.42
SMC1BQ8NDV3 AC138938.1-201ENST00000515431 782 ntBASIC6.21□□□□□ -1.42
SMC1BQ8NDV3 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC6.21□□□□□ -1.42
SMC1BQ8NDV3 AC136777.2-201ENST00000522979 358 ntBASIC6.21□□□□□ -1.42
SMC1BQ8NDV3 AC133555.2-201ENST00000550213 292 ntBASIC6.21□□□□□ -1.42
SMC1BQ8NDV3 AL442163.2-201ENST00000553912 710 ntBASIC6.21□□□□□ -1.42
SMC1BQ8NDV3 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC6.21□□□□□ -1.42
SMC1BQ8NDV3 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC6.21□□□□□ -1.42
SMC1BQ8NDV3 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC6.21□□□□□ -1.42
SMC1BQ8NDV3 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC6.21□□□□□ -1.42
SMC1BQ8NDV3 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC6.21□□□□□ -1.42
SMC1BQ8NDV3 AC067959.1-201ENST00000604334 379 ntBASIC6.21□□□□□ -1.42
SMC1BQ8NDV3 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC6.21□□□□□ -1.42
SMC1BQ8NDV3 AL121873.1-201ENST00000616013 524 ntBASIC6.21□□□□□ -1.42
SMC1BQ8NDV3 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC6.21□□□□□ -1.42
SMC1BQ8NDV3 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SMC1BQ8NDV3 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC6.21□□□□□ -1.42
SMC1BQ8NDV3 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC6.21□□□□□ -1.42
SMC1BQ8NDV3 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SMC1BQ8NDV3 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
SMC1BQ8NDV3 AC104446.1-201ENST00000613728 1321 ntBASIC6.21□□□□□ -1.42
SMC1BQ8NDV3 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
SMC1BQ8NDV3 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
SMC1BQ8NDV3 AC005261.4-201ENST00000600047 1385 ntBASIC6.2□□□□□ -1.42
SMC1BQ8NDV3 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SMC1BQ8NDV3 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SMC1BQ8NDV3 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SMC1BQ8NDV3 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC6.2□□□□□ -1.42
SMC1BQ8NDV3 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.2□□□□□ -1.42
SMC1BQ8NDV3 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SMC1BQ8NDV3 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC6.2□□□□□ -1.42
SMC1BQ8NDV3 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.2□□□□□ -1.42
SMC1BQ8NDV3 SKINT1L-201ENST00000401057 817 ntBASIC6.2□□□□□ -1.42
SMC1BQ8NDV3 RN7SKP114-201ENST00000410327 279 ntBASIC6.2□□□□□ -1.42
SMC1BQ8NDV3 ELOCP19-201ENST00000411919 318 ntBASIC6.2□□□□□ -1.42
SMC1BQ8NDV3 AC009518.2-201ENST00000418056 731 ntBASIC6.2□□□□□ -1.42
SMC1BQ8NDV3 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC6.2□□□□□ -1.42
SMC1BQ8NDV3 AL354766.1-201ENST00000423396 542 ntBASIC6.2□□□□□ -1.42
SMC1BQ8NDV3 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.2□□□□□ -1.42
SMC1BQ8NDV3 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC6.2□□□□□ -1.42
SMC1BQ8NDV3 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC6.2□□□□□ -1.42
SMC1BQ8NDV3 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SMC1BQ8NDV3 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC6.2□□□□□ -1.42
SMC1BQ8NDV3 RPL7P11-201ENST00000437586 658 ntBASIC6.2□□□□□ -1.42
SMC1BQ8NDV3 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC6.2□□□□□ -1.42
SMC1BQ8NDV3 AL137845.2-201ENST00000444292 988 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms