Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC3.84□□□□□ -1.79
SPTA1P02549 AL513477.2-201ENST00000607858 568 ntBASIC3.84□□□□□ -1.79
SPTA1P02549 AC016957.2-201ENST00000616998 848 ntBASIC3.84□□□□□ -1.79
SPTA1P02549 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SPTA1P02549 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
SPTA1P02549 ADAM5-202ENST00000399789 1942 ntBASIC3.84□□□□□ -1.79
SPTA1P02549 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC3.84□□□□□ -1.79
SPTA1P02549 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
SPTA1P02549 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SPTA1P02549 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.84□□□□□ -1.79
SPTA1P02549 AL034370.1-201ENST00000397254 1590 ntBASIC3.84□□□□□ -1.79
SPTA1P02549 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC3.84□□□□□ -1.79
SPTA1P02549 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.84□□□□□ -1.8
SPTA1P02549 RNU1-20P-201ENST00000363314 162 ntBASIC3.84□□□□□ -1.8
SPTA1P02549 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC3.84□□□□□ -1.8
SPTA1P02549 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.84□□□□□ -1.8
SPTA1P02549 OR52E3P-201ENST00000452083 936 ntBASIC3.84□□□□□ -1.8
SPTA1P02549 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.84□□□□□ -1.8
SPTA1P02549 OR8I1P-201ENST00000529291 931 ntBASIC3.84□□□□□ -1.8
SPTA1P02549 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
SPTA1P02549 MRPS21P9-201ENST00000571150 257 ntBASIC3.84□□□□□ -1.8
SPTA1P02549 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.84□□□□□ -1.8
SPTA1P02549 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.84□□□□□ -1.8
SPTA1P02549 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
SPTA1P02549 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
SPTA1P02549 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
SPTA1P02549 MAPK10-304ENST00000641341 3984 ntBASIC3.83□□□□□ -1.8
SPTA1P02549 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
SPTA1P02549 SNX18P3-202ENST00000565670 1750 ntBASIC3.83□□□□□ -1.8
SPTA1P02549 AC104260.2-201ENST00000623551 3497 ntBASIC3.83□□□□□ -1.8
SPTA1P02549 U8.11-201ENST00000384699 133 ntBASIC3.83□□□□□ -1.8
SPTA1P02549 U8.12-201ENST00000384701 133 ntBASIC3.83□□□□□ -1.8
SPTA1P02549 U8.18-201ENST00000459285 133 ntBASIC3.83□□□□□ -1.8
SPTA1P02549 AC010486.1-201ENST00000511793 424 ntBASIC3.83□□□□□ -1.8
SPTA1P02549 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.83□□□□□ -1.8
SPTA1P02549 FP236240.3-201ENST00000623061 327 ntBASIC3.83□□□□□ -1.8
SPTA1P02549 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.83□□□□□ -1.8
SPTA1P02549 AP005435.3-201ENST00000531260 3198 ntBASIC3.83□□□□□ -1.8
SPTA1P02549 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SPTA1P02549 BMPR1APS1-201ENST00000403332 1598 ntBASIC3.83□□□□□ -1.8
SPTA1P02549 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
SPTA1P02549 AC092111.2-201ENST00000611627 1414 ntBASIC3.83□□□□□ -1.8
SPTA1P02549 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
SPTA1P02549 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SPTA1P02549 AC007159.1-201ENST00000566529 4706 ntBASIC3.83□□□□□ -1.8
SPTA1P02549 RNVU1-14-201ENST00000384770 164 ntBASIC3.83□□□□□ -1.8
SPTA1P02549 U3.26-201ENST00000391236 204 ntBASIC3.83□□□□□ -1.8
SPTA1P02549 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.83□□□□□ -1.8
SPTA1P02549 COX6B1P7-201ENST00000430845 235 ntBASIC3.83□□□□□ -1.8
SPTA1P02549 CYCSP24-201ENST00000445119 316 ntBASIC3.83□□□□□ -1.8
SPTA1P02549 ALG13-211ENST00000473389 693 ntTSL 2 BASIC3.83□□□□□ -1.8
SPTA1P02549 AC110792.1-201ENST00000491826 472 ntBASIC3.83□□□□□ -1.8
SPTA1P02549 AL049874.2-201ENST00000492636 288 ntBASIC3.83□□□□□ -1.8
SPTA1P02549 WBP1LP4-201ENST00000505043 344 ntBASIC3.83□□□□□ -1.8
SPTA1P02549 AC069306.1-201ENST00000507006 843 ntBASIC3.83□□□□□ -1.8
SPTA1P02549 GNRHR2P1-201ENST00000555315 631 ntBASIC3.83□□□□□ -1.8
SPTA1P02549 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.83□□□□□ -1.8
SPTA1P02549 MIR6715A-201ENST00000615929 79 ntBASIC3.83□□□□□ -1.8
SPTA1P02549 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SPTA1P02549 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SPTA1P02549 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.83□□□□□ -1.8
SPTA1P02549 WAC-209ENST00000428935 1320 ntTSL 2 BASIC3.82□□□□□ -1.8
SPTA1P02549 MTCO1P12-201ENST00000414273 1543 ntBASIC3.82□□□□□ -1.8
SPTA1P02549 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC3.82□□□□□ -1.8
SPTA1P02549 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
SPTA1P02549 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.82□□□□□ -1.8
SPTA1P02549 CKS1BP6-201ENST00000424932 240 ntBASIC3.82□□□□□ -1.8
SPTA1P02549 MRPL48P1-201ENST00000445390 636 ntBASIC3.82□□□□□ -1.8
SPTA1P02549 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC3.82□□□□□ -1.8
SPTA1P02549 AC115115.1-201ENST00000449927 248 ntBASIC3.82□□□□□ -1.8
SPTA1P02549 RPL38P1-201ENST00000460914 211 ntBASIC3.82□□□□□ -1.8
SPTA1P02549 GAPDHP36-201ENST00000480688 918 ntBASIC3.82□□□□□ -1.8
SPTA1P02549 AC007991.1-201ENST00000522680 631 ntBASIC3.82□□□□□ -1.8
SPTA1P02549 DYNLL1P4-201ENST00000549314 266 ntBASIC3.82□□□□□ -1.8
SPTA1P02549 FKBP1BP1-201ENST00000553366 325 ntBASIC3.82□□□□□ -1.8
SPTA1P02549 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.82□□□□□ -1.8
SPTA1P02549 AL592436.1-201ENST00000605135 558 ntBASIC3.82□□□□□ -1.8
SPTA1P02549 AC005972.3-201ENST00000606304 481 ntBASIC3.82□□□□□ -1.8
SPTA1P02549 AC009120.7-201ENST00000623452 780 ntBASIC3.82□□□□□ -1.8
SPTA1P02549 AC008013.2-202ENST00000637965 364 ntBASIC3.82□□□□□ -1.8
SPTA1P02549 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SPTA1P02549 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC3.82□□□□□ -1.8
SPTA1P02549 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.82□□□□□ -1.8
SPTA1P02549 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
SPTA1P02549 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.82□□□□□ -1.8
SPTA1P02549 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC3.82□□□□□ -1.8
SPTA1P02549 AL592182.3-201ENST00000642132 3304 ntBASIC3.82□□□□□ -1.8
SPTA1P02549 OR52E6-202ENST00000379946 954 ntBASIC3.82□□□□□ -1.8
SPTA1P02549 RNU11-4P-201ENST00000391149 133 ntBASIC3.82□□□□□ -1.8
SPTA1P02549 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.82□□□□□ -1.8
SPTA1P02549 NPM1P34-201ENST00000428821 893 ntBASIC3.82□□□□□ -1.8
SPTA1P02549 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.82□□□□□ -1.8
SPTA1P02549 VN1R32P-201ENST00000452234 905 ntBASIC3.82□□□□□ -1.8
SPTA1P02549 AL049873.1-201ENST00000480540 376 ntBASIC3.82□□□□□ -1.8
SPTA1P02549 RNU1-95P-201ENST00000516357 160 ntBASIC3.82□□□□□ -1.8
SPTA1P02549 RNU1-128P-201ENST00000516704 160 ntBASIC3.82□□□□□ -1.8
SPTA1P02549 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.82□□□□□ -1.8
SPTA1P02549 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.82□□□□□ -1.8
SPTA1P02549 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.82□□□□□ -1.8
SPTA1P02549 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms