Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 AP000346.3-201ENST00000622821 210 ntBASIC4.09□□□□□ -1.75
LRRC58Q96CX6 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.09□□□□□ -1.75
LRRC58Q96CX6 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
LRRC58Q96CX6 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LRRC58Q96CX6 AC007342.9-201ENST00000623877 1385 ntBASIC4.09□□□□□ -1.75
LRRC58Q96CX6 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.09□□□□□ -1.75
LRRC58Q96CX6 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
LRRC58Q96CX6 AC010300.1-201ENST00000600671 5134 ntBASIC4.09□□□□□ -1.76
LRRC58Q96CX6 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
LRRC58Q96CX6 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.08□□□□□ -1.76
LRRC58Q96CX6 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
LRRC58Q96CX6 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LRRC58Q96CX6 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LRRC58Q96CX6 AL592182.3-201ENST00000642132 3304 ntBASIC4.08□□□□□ -1.76
LRRC58Q96CX6 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LRRC58Q96CX6 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
LRRC58Q96CX6 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
LRRC58Q96CX6 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.08□□□□□ -1.76
LRRC58Q96CX6 AC079741.1-201ENST00000321498 212 ntBASIC4.08□□□□□ -1.76
LRRC58Q96CX6 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
LRRC58Q96CX6 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
LRRC58Q96CX6 RNU1-32P-201ENST00000363937 159 ntBASIC4.08□□□□□ -1.76
LRRC58Q96CX6 RNU6-1263P-201ENST00000384601 106 ntBASIC4.08□□□□□ -1.76
LRRC58Q96CX6 RNU2-50P-201ENST00000410494 143 ntBASIC4.08□□□□□ -1.76
LRRC58Q96CX6 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LRRC58Q96CX6 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.08□□□□□ -1.76
LRRC58Q96CX6 MTCO1P51-201ENST00000427672 1060 ntBASIC4.08□□□□□ -1.76
LRRC58Q96CX6 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.08□□□□□ -1.76
LRRC58Q96CX6 AL132765.1-201ENST00000434165 553 ntBASIC4.08□□□□□ -1.76
LRRC58Q96CX6 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.08□□□□□ -1.76
LRRC58Q96CX6 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LRRC58Q96CX6 RPL23AP89-201ENST00000439324 255 ntBASIC4.08□□□□□ -1.76
LRRC58Q96CX6 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.08□□□□□ -1.76
LRRC58Q96CX6 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.08□□□□□ -1.76
LRRC58Q96CX6 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.08□□□□□ -1.76
LRRC58Q96CX6 AC104306.1-201ENST00000449702 371 ntBASIC4.08□□□□□ -1.76
LRRC58Q96CX6 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC4.08□□□□□ -1.76
LRRC58Q96CX6 RPL31P53-201ENST00000457065 348 ntBASIC4.08□□□□□ -1.76
LRRC58Q96CX6 MTND6P32-201ENST00000457611 483 ntBASIC4.08□□□□□ -1.76
LRRC58Q96CX6 AC053481.1-201ENST00000467217 306 ntBASIC4.08□□□□□ -1.76
LRRC58Q96CX6 AC096741.1-201ENST00000472250 846 ntBASIC4.08□□□□□ -1.76
LRRC58Q96CX6 RN7SL481P-201ENST00000477764 299 ntBASIC4.08□□□□□ -1.76
LRRC58Q96CX6 AC113430.1-201ENST00000506872 718 ntBASIC4.08□□□□□ -1.76
LRRC58Q96CX6 TRAV11-201ENST00000539512 339 ntBASIC4.08□□□□□ -1.76
LRRC58Q96CX6 AC006064.5-201ENST00000541782 248 ntBASIC4.08□□□□□ -1.76
LRRC58Q96CX6 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.08□□□□□ -1.76
LRRC58Q96CX6 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.08□□□□□ -1.76
LRRC58Q96CX6 AC091042.1-201ENST00000579213 173 ntBASIC4.08□□□□□ -1.76
LRRC58Q96CX6 FAM60CP-201ENST00000591086 664 ntBASIC4.08□□□□□ -1.76
LRRC58Q96CX6 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.08□□□□□ -1.76
LRRC58Q96CX6 AL133243.1-201ENST00000614487 366 ntBASIC4.08□□□□□ -1.76
LRRC58Q96CX6 AL021997.2-201ENST00000615674 271 ntBASIC4.08□□□□□ -1.76
LRRC58Q96CX6 MIR7703-201ENST00000620784 77 ntBASIC4.08□□□□□ -1.76
LRRC58Q96CX6 MIR7702-201ENST00000621931 59 ntBASIC4.08□□□□□ -1.76
LRRC58Q96CX6 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.08□□□□□ -1.76
LRRC58Q96CX6 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
LRRC58Q96CX6 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
LRRC58Q96CX6 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LRRC58Q96CX6 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.07□□□□□ -1.76
LRRC58Q96CX6 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LRRC58Q96CX6 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.07□□□□□ -1.76
LRRC58Q96CX6 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LRRC58Q96CX6 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.07□□□□□ -1.76
LRRC58Q96CX6 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.07□□□□□ -1.76
LRRC58Q96CX6 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
LRRC58Q96CX6 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
LRRC58Q96CX6 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.07□□□□□ -1.76
LRRC58Q96CX6 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
LRRC58Q96CX6 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
LRRC58Q96CX6 RPS16P5-201ENST00000406501 404 ntBASIC4.07□□□□□ -1.76
LRRC58Q96CX6 AL139095.3-201ENST00000419672 1203 ntBASIC4.07□□□□□ -1.76
LRRC58Q96CX6 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LRRC58Q96CX6 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LRRC58Q96CX6 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.07□□□□□ -1.76
LRRC58Q96CX6 EIF1P3-201ENST00000423841 334 ntBASIC4.07□□□□□ -1.76
LRRC58Q96CX6 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LRRC58Q96CX6 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.07□□□□□ -1.76
LRRC58Q96CX6 MTND6P18-201ENST00000439477 513 ntBASIC4.07□□□□□ -1.76
LRRC58Q96CX6 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.07□□□□□ -1.76
LRRC58Q96CX6 AC073264.2-201ENST00000448886 166 ntBASIC4.07□□□□□ -1.76
LRRC58Q96CX6 RNU6-775P-201ENST00000459318 96 ntBASIC4.07□□□□□ -1.76
LRRC58Q96CX6 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
LRRC58Q96CX6 RN7SL459P-201ENST00000481078 302 ntBASIC4.07□□□□□ -1.76
LRRC58Q96CX6 RPS6P4-201ENST00000494693 758 ntBASIC4.07□□□□□ -1.76
LRRC58Q96CX6 BNIP3P41-201ENST00000503774 571 ntBASIC4.07□□□□□ -1.76
LRRC58Q96CX6 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.07□□□□□ -1.76
LRRC58Q96CX6 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.07□□□□□ -1.76
LRRC58Q96CX6 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.07□□□□□ -1.76
LRRC58Q96CX6 IGKV1-32-201ENST00000519290 311 ntBASIC4.07□□□□□ -1.76
LRRC58Q96CX6 RAB9BP1-201ENST00000519581 626 ntBASIC4.07□□□□□ -1.76
LRRC58Q96CX6 OR7E10P-201ENST00000526420 991 ntBASIC4.07□□□□□ -1.76
LRRC58Q96CX6 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LRRC58Q96CX6 AP001781.1-201ENST00000530977 207 ntBASIC4.07□□□□□ -1.76
LRRC58Q96CX6 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.07□□□□□ -1.76
LRRC58Q96CX6 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
LRRC58Q96CX6 OR5AN2P-201ENST00000534535 896 ntBASIC4.07□□□□□ -1.76
LRRC58Q96CX6 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.07□□□□□ -1.76
LRRC58Q96CX6 AP006289.1-201ENST00000538089 277 ntBASIC4.07□□□□□ -1.76
LRRC58Q96CX6 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.07□□□□□ -1.76
LRRC58Q96CX6 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms