Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC5.1□□□□□ -1.59
CLRN1P58418 PABPC1P9-201ENST00000426076 1612 ntBASIC5.1□□□□□ -1.59
CLRN1P58418 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC5.1□□□□□ -1.59
CLRN1P58418 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.1□□□□□ -1.59
CLRN1P58418 AC115283.1-201ENST00000427353 400 ntBASIC5.1□□□□□ -1.59
CLRN1P58418 OFD1P12Y-201ENST00000427963 1207 ntBASIC5.1□□□□□ -1.59
CLRN1P58418 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.1□□□□□ -1.59
CLRN1P58418 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.1□□□□□ -1.59
CLRN1P58418 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.1□□□□□ -1.59
CLRN1P58418 AL031663.1-201ENST00000437445 219 ntBASIC5.1□□□□□ -1.59
CLRN1P58418 AL512286.1-201ENST00000439244 400 ntBASIC5.1□□□□□ -1.59
CLRN1P58418 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.1□□□□□ -1.59
CLRN1P58418 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC5.1□□□□□ -1.59
CLRN1P58418 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.1□□□□□ -1.59
CLRN1P58418 MTND4P18-201ENST00000447010 465 ntBASIC5.1□□□□□ -1.59
CLRN1P58418 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC5.1□□□□□ -1.59
CLRN1P58418 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.1□□□□□ -1.59
CLRN1P58418 RPL7AP52-201ENST00000458096 790 ntBASIC5.1□□□□□ -1.59
CLRN1P58418 RPL23AP12-201ENST00000467573 473 ntBASIC5.1□□□□□ -1.59
CLRN1P58418 AC112206.1-201ENST00000468416 477 ntBASIC5.1□□□□□ -1.59
CLRN1P58418 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.1□□□□□ -1.59
CLRN1P58418 HMGN2P25-201ENST00000486956 268 ntBASIC5.1□□□□□ -1.59
CLRN1P58418 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLRN1P58418 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.1□□□□□ -1.59
CLRN1P58418 ARL2BPP4-201ENST00000506854 471 ntBASIC5.1□□□□□ -1.59
CLRN1P58418 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.1□□□□□ -1.59
CLRN1P58418 GTF2F2P1-201ENST00000511083 675 ntBASIC5.1□□□□□ -1.59
CLRN1P58418 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CLRN1P58418 MTCO1P30-201ENST00000515244 580 ntBASIC5.1□□□□□ -1.59
CLRN1P58418 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CLRN1P58418 SCARNA6.1-201ENST00000516989 238 ntBASIC5.1□□□□□ -1.59
CLRN1P58418 RNU6-1261P-201ENST00000517194 104 ntBASIC5.1□□□□□ -1.59
CLRN1P58418 AC008802.1-201ENST00000519121 791 ntBASIC5.1□□□□□ -1.59
CLRN1P58418 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC5.1□□□□□ -1.59
CLRN1P58418 AP003392.2-201ENST00000527269 208 ntBASIC5.1□□□□□ -1.59
CLRN1P58418 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC5.1□□□□□ -1.59
CLRN1P58418 AP002373.2-201ENST00000541631 1060 ntBASIC5.1□□□□□ -1.59
CLRN1P58418 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
CLRN1P58418 CR383658.2-201ENST00000547576 1525 ntBASIC5.1□□□□□ -1.59
CLRN1P58418 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.1□□□□□ -1.59
CLRN1P58418 AC092121.1-201ENST00000569452 202 ntBASIC5.1□□□□□ -1.59
CLRN1P58418 AL121834.1-201ENST00000572284 509 ntBASIC5.1□□□□□ -1.59
CLRN1P58418 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC5.1□□□□□ -1.59
CLRN1P58418 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC5.1□□□□□ -1.59
CLRN1P58418 COX6CP7-201ENST00000597056 208 ntBASIC5.1□□□□□ -1.59
CLRN1P58418 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.1□□□□□ -1.59
CLRN1P58418 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.1□□□□□ -1.59
CLRN1P58418 AC091805.2-201ENST00000603848 235 ntBASIC5.1□□□□□ -1.59
CLRN1P58418 LSM1P2-201ENST00000604911 322 ntBASIC5.1□□□□□ -1.59
CLRN1P58418 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.1□□□□□ -1.59
CLRN1P58418 AL355488.2-201ENST00000609909 2850 ntBASIC5.1□□□□□ -1.59
CLRN1P58418 AC138749.5-201ENST00000611461 208 ntBASIC5.1□□□□□ -1.59
CLRN1P58418 AL138960.1-201ENST00000613838 513 ntBASIC5.1□□□□□ -1.59
CLRN1P58418 AC092650.2-201ENST00000619984 902 ntBASIC5.1□□□□□ -1.59
CLRN1P58418 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.1□□□□□ -1.59
CLRN1P58418 AC079776.5-201ENST00000641920 211 ntBASIC5.1□□□□□ -1.59
CLRN1P58418 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CLRN1P58418 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CLRN1P58418 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLRN1P58418 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.1□□□□□ -1.59
CLRN1P58418 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.09□□□□□ -1.59
CLRN1P58418 AC138907.8-201ENST00000623981 2256 ntBASIC5.09□□□□□ -1.59
CLRN1P58418 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.09□□□□□ -1.59
CLRN1P58418 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
CLRN1P58418 DBF4P1-201ENST00000412976 1892 ntBASIC5.09□□□□□ -1.59
CLRN1P58418 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
CLRN1P58418 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.09□□□□□ -1.59
CLRN1P58418 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CLRN1P58418 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CLRN1P58418 ANKRD36BP1-202ENST00000604892 1417 ntBASIC5.09□□□□□ -1.59
CLRN1P58418 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CLRN1P58418 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CLRN1P58418 U3.10-201ENST00000364459 214 ntBASIC5.09□□□□□ -1.59
CLRN1P58418 RNA5SP500-201ENST00000364486 119 ntBASIC5.09□□□□□ -1.59
CLRN1P58418 RNA5SP88-201ENST00000365560 109 ntBASIC5.09□□□□□ -1.59
CLRN1P58418 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CLRN1P58418 MIR130A-201ENST00000385274 89 ntBASIC5.09□□□□□ -1.59
CLRN1P58418 AC087752.1-201ENST00000391360 558 ntBASIC5.09□□□□□ -1.59
CLRN1P58418 AC007066.1-201ENST00000392902 381 ntBASIC5.09□□□□□ -1.59
CLRN1P58418 RPL23AP29-201ENST00000397284 453 ntBASIC5.09□□□□□ -1.59
CLRN1P58418 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
CLRN1P58418 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.09□□□□□ -1.59
CLRN1P58418 NCSTNP1-201ENST00000406229 144 ntBASIC5.09□□□□□ -1.59
CLRN1P58418 MIR1203-201ENST00000408812 85 ntBASIC5.09□□□□□ -1.59
CLRN1P58418 RNU6-272P-201ENST00000411028 104 ntBASIC5.09□□□□□ -1.59
CLRN1P58418 MTND1P23-201ENST00000416931 372 ntBASIC5.09□□□□□ -1.59
CLRN1P58418 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CLRN1P58418 REREP1Y-201ENST00000422655 198 ntBASIC5.09□□□□□ -1.59
CLRN1P58418 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CLRN1P58418 AC093698.1-201ENST00000423843 571 ntBASIC5.09□□□□□ -1.59
CLRN1P58418 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC5.09□□□□□ -1.59
CLRN1P58418 TMEM183AP1-205ENST00000432739 290 ntBASIC5.09□□□□□ -1.59
CLRN1P58418 REREP2Y-201ENST00000439103 200 ntBASIC5.09□□□□□ -1.59
CLRN1P58418 UBE2V1P3-201ENST00000439651 417 ntBASIC5.09□□□□□ -1.59
CLRN1P58418 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC5.09□□□□□ -1.59
CLRN1P58418 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC5.09□□□□□ -1.59
CLRN1P58418 AL035551.1-201ENST00000446931 348 ntBASIC5.09□□□□□ -1.59
CLRN1P58418 RPS27AP15-201ENST00000447672 466 ntBASIC5.09□□□□□ -1.59
CLRN1P58418 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.09□□□□□ -1.59
CLRN1P58418 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 365 ms