Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.95□□□□□ -1.62
COL2A1P02458 AL445584.1-201ENST00000431451 330 ntBASIC4.95□□□□□ -1.62
COL2A1P02458 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.95□□□□□ -1.62
COL2A1P02458 RPS27AP15-201ENST00000447672 466 ntBASIC4.95□□□□□ -1.62
COL2A1P02458 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC4.95□□□□□ -1.62
COL2A1P02458 NPM1P21-201ENST00000513394 762 ntBASIC4.95□□□□□ -1.62
COL2A1P02458 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.95□□□□□ -1.62
COL2A1P02458 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.95□□□□□ -1.62
COL2A1P02458 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.95□□□□□ -1.62
COL2A1P02458 SNRPGP1-201ENST00000553864 222 ntBASIC4.95□□□□□ -1.62
COL2A1P02458 AGGF1P6-201ENST00000569213 976 ntBASIC4.95□□□□□ -1.62
COL2A1P02458 AC008759.1-201ENST00000589783 983 ntBASIC4.95□□□□□ -1.62
COL2A1P02458 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.95□□□□□ -1.62
COL2A1P02458 AC007620.3-201ENST00000608131 497 ntBASIC4.95□□□□□ -1.62
COL2A1P02458 USP9YP4-201ENST00000424401 1745 ntBASIC4.95□□□□□ -1.62
COL2A1P02458 CASC19-261ENST00000641853 1638 ntBASIC4.95□□□□□ -1.62
COL2A1P02458 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.95□□□□□ -1.62
COL2A1P02458 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL2A1P02458 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
COL2A1P02458 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
COL2A1P02458 RNA5SP119-201ENST00000362715 117 ntBASIC4.94□□□□□ -1.62
COL2A1P02458 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC4.94□□□□□ -1.62
COL2A1P02458 MTND2P15-201ENST00000418575 892 ntBASIC4.94□□□□□ -1.62
COL2A1P02458 OR6C71P-201ENST00000432580 913 ntBASIC4.94□□□□□ -1.62
COL2A1P02458 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.94□□□□□ -1.62
COL2A1P02458 RPS29P19-201ENST00000479709 171 ntBASIC4.94□□□□□ -1.62
COL2A1P02458 AF213884.1-201ENST00000488102 463 ntBASIC4.94□□□□□ -1.62
COL2A1P02458 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC4.94□□□□□ -1.62
COL2A1P02458 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.94□□□□□ -1.62
COL2A1P02458 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.94□□□□□ -1.62
COL2A1P02458 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.94□□□□□ -1.62
COL2A1P02458 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.94□□□□□ -1.62
COL2A1P02458 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.94□□□□□ -1.62
COL2A1P02458 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.94□□□□□ -1.62
COL2A1P02458 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC4.94□□□□□ -1.62
COL2A1P02458 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.94□□□□□ -1.62
COL2A1P02458 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.94□□□□□ -1.62
COL2A1P02458 AC090330.1-201ENST00000588646 764 ntBASIC4.94□□□□□ -1.62
COL2A1P02458 AC012468.1-201ENST00000604888 430 ntBASIC4.94□□□□□ -1.62
COL2A1P02458 AC022106.2-201ENST00000620114 757 ntBASIC4.94□□□□□ -1.62
COL2A1P02458 AC020923.1-201ENST00000624021 917 ntBASIC4.94□□□□□ -1.62
COL2A1P02458 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
COL2A1P02458 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
COL2A1P02458 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
COL2A1P02458 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
COL2A1P02458 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.94□□□□□ -1.62
COL2A1P02458 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC4.94□□□□□ -1.62
COL2A1P02458 AC007342.9-201ENST00000623877 1385 ntBASIC4.94□□□□□ -1.62
COL2A1P02458 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
COL2A1P02458 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.94□□□□□ -1.62
COL2A1P02458 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.94□□□□□ -1.62
COL2A1P02458 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
COL2A1P02458 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.94□□□□□ -1.62
COL2A1P02458 SNORD66.1-201ENST00000391230 76 ntBASIC4.94□□□□□ -1.62
COL2A1P02458 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
COL2A1P02458 RN7SKP199-201ENST00000410325 305 ntBASIC4.94□□□□□ -1.62
COL2A1P02458 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.94□□□□□ -1.62
COL2A1P02458 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.94□□□□□ -1.62
COL2A1P02458 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.94□□□□□ -1.62
COL2A1P02458 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.94□□□□□ -1.62
COL2A1P02458 RPL38P1-201ENST00000460914 211 ntBASIC4.94□□□□□ -1.62
COL2A1P02458 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.94□□□□□ -1.62
COL2A1P02458 IFITM8P-201ENST00000522529 394 ntBASIC4.94□□□□□ -1.62
COL2A1P02458 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC4.94□□□□□ -1.62
COL2A1P02458 AC093014.1-201ENST00000548926 724 ntBASIC4.94□□□□□ -1.62
COL2A1P02458 AC018816.2-201ENST00000621460 353 ntBASIC4.94□□□□□ -1.62
COL2A1P02458 AC019278.1-201ENST00000623516 479 ntBASIC4.94□□□□□ -1.62
COL2A1P02458 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC4.94□□□□□ -1.62
COL2A1P02458 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.94□□□□□ -1.62
COL2A1P02458 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL2A1P02458 PCAT14-202ENST00000627127 3935 ntBASIC4.93□□□□□ -1.62
COL2A1P02458 Z82217.1-201ENST00000625157 8149 ntBASIC4.93□□□□□ -1.62
COL2A1P02458 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.93□□□□□ -1.62
COL2A1P02458 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.93□□□□□ -1.62
COL2A1P02458 AC092162.3-201ENST00000624511 1624 ntBASIC4.93□□□□□ -1.62
COL2A1P02458 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
COL2A1P02458 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL2A1P02458 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL2A1P02458 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.93□□□□□ -1.62
COL2A1P02458 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
COL2A1P02458 SNORD96B-201ENST00000386148 79 ntBASIC4.93□□□□□ -1.62
COL2A1P02458 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL2A1P02458 RBMY1KP-201ENST00000423480 476 ntBASIC4.93□□□□□ -1.62
COL2A1P02458 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.93□□□□□ -1.62
COL2A1P02458 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.93□□□□□ -1.62
COL2A1P02458 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
COL2A1P02458 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.93□□□□□ -1.62
COL2A1P02458 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.93□□□□□ -1.62
COL2A1P02458 RNU6-551P-201ENST00000516661 103 ntBASIC4.93□□□□□ -1.62
COL2A1P02458 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.93□□□□□ -1.62
COL2A1P02458 AL158211.1-201ENST00000566763 763 ntBASIC4.93□□□□□ -1.62
COL2A1P02458 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.93□□□□□ -1.62
COL2A1P02458 SNORD91B-202ENST00000608459 222 ntBASIC4.93□□□□□ -1.62
COL2A1P02458 MIR6875-201ENST00000617506 72 ntBASIC4.93□□□□□ -1.62
COL2A1P02458 AC080188.3-201ENST00000624842 748 ntBASIC4.93□□□□□ -1.62
COL2A1P02458 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.93□□□□□ -1.62
COL2A1P02458 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
COL2A1P02458 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
COL2A1P02458 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
COL2A1P02458 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 192.4 ms