Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CLPTM1O96005 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.5□□□□□ -1.69
CLPTM1O96005 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
CLPTM1O96005 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CLPTM1O96005 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.49□□□□□ -1.69
CLPTM1O96005 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CLPTM1O96005 AC009229.4-201ENST00000623854 1947 ntBASIC4.49□□□□□ -1.69
CLPTM1O96005 AL592437.2-201ENST00000421655 2434 ntBASIC4.49□□□□□ -1.69
CLPTM1O96005 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CLPTM1O96005 RNU6-481P-201ENST00000384194 107 ntBASIC4.49□□□□□ -1.69
CLPTM1O96005 SNORA70-201ENST00000384436 135 ntBASIC4.49□□□□□ -1.69
CLPTM1O96005 RNU6-1005P-201ENST00000384519 107 ntBASIC4.49□□□□□ -1.69
CLPTM1O96005 RNU6-1257P-201ENST00000384625 110 ntBASIC4.49□□□□□ -1.69
CLPTM1O96005 RNA5SP105-201ENST00000391123 113 ntBASIC4.49□□□□□ -1.69
CLPTM1O96005 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CLPTM1O96005 RNU4-34P-201ENST00000410431 124 ntBASIC4.49□□□□□ -1.69
CLPTM1O96005 RN7SKP126-201ENST00000411143 300 ntBASIC4.49□□□□□ -1.69
CLPTM1O96005 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.49□□□□□ -1.69
CLPTM1O96005 TATDN1P1-201ENST00000414123 891 ntBASIC4.49□□□□□ -1.69
CLPTM1O96005 AL445183.3-201ENST00000414168 502 ntBASIC4.49□□□□□ -1.69
CLPTM1O96005 BMS1P13-201ENST00000417301 885 ntBASIC4.49□□□□□ -1.69
CLPTM1O96005 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC4.49□□□□□ -1.69
CLPTM1O96005 AC114973.1-201ENST00000429057 632 ntBASIC4.49□□□□□ -1.69
CLPTM1O96005 TRBV26OR9-2-201ENST00000432077 293 ntBASIC4.49□□□□□ -1.69
CLPTM1O96005 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.49□□□□□ -1.69
CLPTM1O96005 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.49□□□□□ -1.69
CLPTM1O96005 Z80107.1-201ENST00000436830 412 ntBASIC4.49□□□□□ -1.69
CLPTM1O96005 RPL7P33-201ENST00000444159 742 ntBASIC4.49□□□□□ -1.69
CLPTM1O96005 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.49□□□□□ -1.69
CLPTM1O96005 AC104651.2-201ENST00000447549 528 ntBASIC4.49□□□□□ -1.69
CLPTM1O96005 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.49□□□□□ -1.69
CLPTM1O96005 AL389915.2-201ENST00000454576 441 ntBASIC4.49□□□□□ -1.69
CLPTM1O96005 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.49□□□□□ -1.69
CLPTM1O96005 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.49□□□□□ -1.69
CLPTM1O96005 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.49□□□□□ -1.69
CLPTM1O96005 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.49□□□□□ -1.69
CLPTM1O96005 CYCSP20-201ENST00000473154 315 ntBASIC4.49□□□□□ -1.69
CLPTM1O96005 SETP6-201ENST00000479329 568 ntBASIC4.49□□□□□ -1.69
CLPTM1O96005 AC004815.1-201ENST00000484185 331 ntBASIC4.49□□□□□ -1.69
CLPTM1O96005 RPS6P4-201ENST00000494693 758 ntBASIC4.49□□□□□ -1.69
CLPTM1O96005 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.49□□□□□ -1.69
CLPTM1O96005 PRELID3BP6-201ENST00000503839 571 ntBASIC4.49□□□□□ -1.69
CLPTM1O96005 AC008638.1-201ENST00000506035 866 ntBASIC4.49□□□□□ -1.69
CLPTM1O96005 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.49□□□□□ -1.69
CLPTM1O96005 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.49□□□□□ -1.69
CLPTM1O96005 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.49□□□□□ -1.69
CLPTM1O96005 GTF2F2P1-201ENST00000511083 675 ntBASIC4.49□□□□□ -1.69
CLPTM1O96005 RNA5SP497-201ENST00000516081 97 ntBASIC4.49□□□□□ -1.69
CLPTM1O96005 Y_RNA.719-201ENST00000517156 106 ntBASIC4.49□□□□□ -1.69
CLPTM1O96005 IGLV3-26-201ENST00000520756 302 ntBASIC4.49□□□□□ -1.69
CLPTM1O96005 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.49□□□□□ -1.69
CLPTM1O96005 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CLPTM1O96005 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CLPTM1O96005 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CLPTM1O96005 MIR3691-201ENST00000578066 90 ntBASIC4.49□□□□□ -1.69
CLPTM1O96005 EIF1P5-201ENST00000585002 234 ntBASIC4.49□□□□□ -1.69
CLPTM1O96005 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.49□□□□□ -1.69
CLPTM1O96005 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CLPTM1O96005 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.49□□□□□ -1.69
CLPTM1O96005 AC112503.1-201ENST00000608436 391 ntBASIC4.49□□□□□ -1.69
CLPTM1O96005 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC4.49□□□□□ -1.69
CLPTM1O96005 AC116447.1-201ENST00000613153 453 ntBASIC4.49□□□□□ -1.69
CLPTM1O96005 AC016769.4-201ENST00000616893 535 ntBASIC4.49□□□□□ -1.69
CLPTM1O96005 AC078880.5-201ENST00000617845 421 ntBASIC4.49□□□□□ -1.69
CLPTM1O96005 MIR6719-201ENST00000622428 87 ntBASIC4.49□□□□□ -1.69
CLPTM1O96005 AP006248.2-201ENST00000623309 592 ntBASIC4.49□□□□□ -1.69
CLPTM1O96005 AC092159.4-201ENST00000624944 550 ntBASIC4.49□□□□□ -1.69
CLPTM1O96005 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.49□□□□□ -1.69
CLPTM1O96005 AC008993.2-201ENST00000631744 806 ntBASIC4.49□□□□□ -1.69
CLPTM1O96005 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.49□□□□□ -1.69
CLPTM1O96005 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.49□□□□□ -1.69
CLPTM1O96005 AC106754.1-201ENST00000562632 1513 ntBASIC4.49□□□□□ -1.69
CLPTM1O96005 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
CLPTM1O96005 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CLPTM1O96005 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.49□□□□□ -1.69
CLPTM1O96005 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
CLPTM1O96005 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CLPTM1O96005 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CLPTM1O96005 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CLPTM1O96005 CYP1D1P-201ENST00000416662 1433 ntBASIC4.48□□□□□ -1.69
CLPTM1O96005 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.48□□□□□ -1.69
CLPTM1O96005 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
CLPTM1O96005 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
CLPTM1O96005 U3.3-201ENST00000362986 216 ntBASIC4.48□□□□□ -1.69
CLPTM1O96005 RNU6-252P-201ENST00000363232 107 ntBASIC4.48□□□□□ -1.69
CLPTM1O96005 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.48□□□□□ -1.69
CLPTM1O96005 AL158825.1-201ENST00000414735 521 ntBASIC4.48□□□□□ -1.69
CLPTM1O96005 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC4.48□□□□□ -1.69
CLPTM1O96005 Z74021.1-201ENST00000423610 407 ntBASIC4.48□□□□□ -1.69
CLPTM1O96005 EI24P4-201ENST00000423683 1078 ntBASIC4.48□□□□□ -1.69
CLPTM1O96005 AL160175.1-201ENST00000428124 247 ntBASIC4.48□□□□□ -1.69
CLPTM1O96005 NDUFA5P10-201ENST00000432147 357 ntBASIC4.48□□□□□ -1.69
CLPTM1O96005 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.48□□□□□ -1.69
CLPTM1O96005 MTCYBP29-201ENST00000436327 1006 ntBASIC4.48□□□□□ -1.69
CLPTM1O96005 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC4.48□□□□□ -1.69
CLPTM1O96005 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.48□□□□□ -1.69
CLPTM1O96005 PRPF38AP2-201ENST00000438179 851 ntBASIC4.48□□□□□ -1.69
CLPTM1O96005 AC006994.1-201ENST00000438212 839 ntBASIC4.48□□□□□ -1.69
CLPTM1O96005 AC004854.1-201ENST00000440356 349 ntBASIC4.48□□□□□ -1.69
CLPTM1O96005 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms