Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 EIF1AXP2-201ENST00000555940 413 ntBASIC5.15□□□□□ -1.59
SHROOM1Q2M3G4 AC011270.1-201ENST00000558606 583 ntBASIC5.15□□□□□ -1.59
SHROOM1Q2M3G4 BNIP3P5-201ENST00000562290 498 ntBASIC5.15□□□□□ -1.59
SHROOM1Q2M3G4 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.15□□□□□ -1.59
SHROOM1Q2M3G4 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.15□□□□□ -1.59
SHROOM1Q2M3G4 AC022916.3-201ENST00000592961 742 ntBASIC5.15□□□□□ -1.59
SHROOM1Q2M3G4 RNF138P2-201ENST00000603490 592 ntBASIC5.15□□□□□ -1.59
SHROOM1Q2M3G4 IMMP1LP1-201ENST00000605170 488 ntBASIC5.15□□□□□ -1.59
SHROOM1Q2M3G4 AL008729.2-201ENST00000606393 473 ntBASIC5.15□□□□□ -1.59
SHROOM1Q2M3G4 AL592494.3-201ENST00000609485 464 ntBASIC5.15□□□□□ -1.59
SHROOM1Q2M3G4 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.15□□□□□ -1.59
SHROOM1Q2M3G4 AL391597.1-201ENST00000618707 694 ntBASIC5.15□□□□□ -1.59
SHROOM1Q2M3G4 AC007546.1-201ENST00000619452 559 ntBASIC5.15□□□□□ -1.59
SHROOM1Q2M3G4 AC008079.2-201ENST00000623543 20396 ntBASIC5.15□□□□□ -1.59
SHROOM1Q2M3G4 AC000123.3-201ENST00000624029 4975 ntBASIC5.15□□□□□ -1.59
SHROOM1Q2M3G4 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.59
SHROOM1Q2M3G4 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SHROOM1Q2M3G4 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
SHROOM1Q2M3G4 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
SHROOM1Q2M3G4 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
SHROOM1Q2M3G4 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC5.14□□□□□ -1.59
SHROOM1Q2M3G4 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.14□□□□□ -1.59
SHROOM1Q2M3G4 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SHROOM1Q2M3G4 AP001642.1-201ENST00000624727 2117 ntBASIC5.14□□□□□ -1.59
SHROOM1Q2M3G4 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
SHROOM1Q2M3G4 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.14□□□□□ -1.59
SHROOM1Q2M3G4 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
SHROOM1Q2M3G4 AP001273.1-201ENST00000624493 3152 ntBASIC5.14□□□□□ -1.59
SHROOM1Q2M3G4 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SHROOM1Q2M3G4 MIR365B-201ENST00000362317 111 ntBASIC5.14□□□□□ -1.59
SHROOM1Q2M3G4 RNU1-94P-201ENST00000362627 173 ntBASIC5.14□□□□□ -1.59
SHROOM1Q2M3G4 RN7SKP280-201ENST00000364196 304 ntBASIC5.14□□□□□ -1.59
SHROOM1Q2M3G4 MIR3065-201ENST00000390137 79 ntBASIC5.14□□□□□ -1.59
SHROOM1Q2M3G4 ATP5F1P2-201ENST00000398143 760 ntBASIC5.14□□□□□ -1.59
SHROOM1Q2M3G4 SNORA11F-201ENST00000408237 128 ntBASIC5.14□□□□□ -1.59
SHROOM1Q2M3G4 CTSL3P-202ENST00000412179 788 ntBASIC5.14□□□□□ -1.59
SHROOM1Q2M3G4 OR2AH1P-201ENST00000425717 928 ntBASIC5.14□□□□□ -1.59
SHROOM1Q2M3G4 RPL12P46-201ENST00000436610 195 ntBASIC5.14□□□□□ -1.59
SHROOM1Q2M3G4 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.14□□□□□ -1.59
SHROOM1Q2M3G4 AC092013.1-201ENST00000438795 332 ntBASIC5.14□□□□□ -1.59
SHROOM1Q2M3G4 AL357520.1-201ENST00000441557 453 ntBASIC5.14□□□□□ -1.59
SHROOM1Q2M3G4 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.14□□□□□ -1.59
SHROOM1Q2M3G4 TCEA1P3-201ENST00000443005 880 ntBASIC5.14□□□□□ -1.59
SHROOM1Q2M3G4 AC114755.5-201ENST00000447760 831 ntBASIC5.14□□□□□ -1.59
SHROOM1Q2M3G4 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC5.14□□□□□ -1.59
SHROOM1Q2M3G4 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.14□□□□□ -1.59
SHROOM1Q2M3G4 HMGB3P16-201ENST00000508037 287 ntBASIC5.14□□□□□ -1.59
SHROOM1Q2M3G4 ATP1B1P1-201ENST00000509767 915 ntBASIC5.14□□□□□ -1.59
SHROOM1Q2M3G4 PARP4P3-201ENST00000510265 317 ntBASIC5.14□□□□□ -1.59
SHROOM1Q2M3G4 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.14□□□□□ -1.59
SHROOM1Q2M3G4 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SHROOM1Q2M3G4 RNU6-751P-201ENST00000516382 101 ntBASIC5.14□□□□□ -1.59
SHROOM1Q2M3G4 RNA5SP519-201ENST00000516480 119 ntBASIC5.14□□□□□ -1.59
SHROOM1Q2M3G4 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC5.14□□□□□ -1.59
SHROOM1Q2M3G4 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.14□□□□□ -1.59
SHROOM1Q2M3G4 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.14□□□□□ -1.59
SHROOM1Q2M3G4 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5.14□□□□□ -1.59
SHROOM1Q2M3G4 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.14□□□□□ -1.59
SHROOM1Q2M3G4 AC090312.1-201ENST00000580637 348 ntBASIC5.14□□□□□ -1.59
SHROOM1Q2M3G4 AL161729.3-201ENST00000603533 673 ntBASIC5.14□□□□□ -1.59
SHROOM1Q2M3G4 AC133552.5-201ENST00000604266 540 ntBASIC5.14□□□□□ -1.59
SHROOM1Q2M3G4 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.14□□□□□ -1.59
SHROOM1Q2M3G4 AC019131.2-201ENST00000609071 870 ntBASIC5.14□□□□□ -1.59
SHROOM1Q2M3G4 MIR6867-201ENST00000610636 67 ntBASIC5.14□□□□□ -1.59
SHROOM1Q2M3G4 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.14□□□□□ -1.59
SHROOM1Q2M3G4 AC140479.6-201ENST00000633535 357 ntBASIC5.14□□□□□ -1.59
SHROOM1Q2M3G4 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
SHROOM1Q2M3G4 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
SHROOM1Q2M3G4 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.14□□□□□ -1.59
SHROOM1Q2M3G4 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.14□□□□□ -1.59
SHROOM1Q2M3G4 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
SHROOM1Q2M3G4 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
SHROOM1Q2M3G4 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SHROOM1Q2M3G4 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
SHROOM1Q2M3G4 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SHROOM1Q2M3G4 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SHROOM1Q2M3G4 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SHROOM1Q2M3G4 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SHROOM1Q2M3G4 DHX9P1-201ENST00000436565 3076 ntBASIC5.13□□□□□ -1.59
SHROOM1Q2M3G4 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SHROOM1Q2M3G4 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SHROOM1Q2M3G4 AL359922.3-201ENST00000624779 1670 ntBASIC5.13□□□□□ -1.59
SHROOM1Q2M3G4 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SHROOM1Q2M3G4 RNA5SP388-201ENST00000362584 119 ntBASIC5.13□□□□□ -1.59
SHROOM1Q2M3G4 RNA5SP283-201ENST00000365604 119 ntBASIC5.13□□□□□ -1.59
SHROOM1Q2M3G4 RPS26P8-201ENST00000393490 348 ntBASIC5.13□□□□□ -1.59
SHROOM1Q2M3G4 AL022722.2-201ENST00000402519 180 ntBASIC5.13□□□□□ -1.59
SHROOM1Q2M3G4 RNA5SP36-201ENST00000410197 133 ntBASIC5.13□□□□□ -1.59
SHROOM1Q2M3G4 RN7SKP27-201ENST00000410684 333 ntBASIC5.13□□□□□ -1.59
SHROOM1Q2M3G4 TRGV6-201ENST00000417928 299 ntBASIC5.13□□□□□ -1.59
SHROOM1Q2M3G4 SLC4A1APP1-201ENST00000419995 602 ntBASIC5.13□□□□□ -1.59
SHROOM1Q2M3G4 RPL23AP38-201ENST00000423801 469 ntBASIC5.13□□□□□ -1.59
SHROOM1Q2M3G4 RPS26P47-201ENST00000427219 348 ntBASIC5.13□□□□□ -1.59
SHROOM1Q2M3G4 RPL21P91-201ENST00000429231 479 ntBASIC5.13□□□□□ -1.59
SHROOM1Q2M3G4 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.13□□□□□ -1.59
SHROOM1Q2M3G4 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.13□□□□□ -1.59
SHROOM1Q2M3G4 RPL35AP15-201ENST00000468042 339 ntBASIC5.13□□□□□ -1.59
SHROOM1Q2M3G4 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SHROOM1Q2M3G4 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.13□□□□□ -1.59
SHROOM1Q2M3G4 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms