Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.06□□□□□ -1.6
PTPN9P43378 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.05□□□□□ -1.6
PTPN9P43378 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PTPN9P43378 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.05□□□□□ -1.6
PTPN9P43378 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.05□□□□□ -1.6
PTPN9P43378 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PTPN9P43378 AP001642.1-201ENST00000624727 2117 ntBASIC5.05□□□□□ -1.6
PTPN9P43378 ZNF652P1-201ENST00000442420 1309 ntBASIC5.05□□□□□ -1.6
PTPN9P43378 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PTPN9P43378 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.05□□□□□ -1.6
PTPN9P43378 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
PTPN9P43378 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PTPN9P43378 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
PTPN9P43378 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PTPN9P43378 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PTPN9P43378 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
PTPN9P43378 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PTPN9P43378 AL589647.1-201ENST00000402485 466 ntBASIC5.05□□□□□ -1.6
PTPN9P43378 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.05□□□□□ -1.6
PTPN9P43378 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC5.05□□□□□ -1.6
PTPN9P43378 LINC00993-201ENST00000420453 540 ntBASIC5.05□□□□□ -1.6
PTPN9P43378 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.05□□□□□ -1.6
PTPN9P43378 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC5.05□□□□□ -1.6
PTPN9P43378 OR2AH1P-201ENST00000425717 928 ntBASIC5.05□□□□□ -1.6
PTPN9P43378 AL035246.1-201ENST00000433554 1255 ntBASIC5.05□□□□□ -1.6
PTPN9P43378 AL050341.1-201ENST00000447743 313 ntBASIC5.05□□□□□ -1.6
PTPN9P43378 RPS3AP53-201ENST00000454716 778 ntBASIC5.05□□□□□ -1.6
PTPN9P43378 AURKAPS2-201ENST00000454983 333 ntBASIC5.05□□□□□ -1.6
PTPN9P43378 AL133244.1-201ENST00000456007 258 ntBASIC5.05□□□□□ -1.6
PTPN9P43378 snoU13.20-201ENST00000459180 104 ntBASIC5.05□□□□□ -1.6
PTPN9P43378 RN7SL515P-201ENST00000463999 297 ntBASIC5.05□□□□□ -1.6
PTPN9P43378 RN7SL329P-201ENST00000467740 299 ntBASIC5.05□□□□□ -1.6
PTPN9P43378 AC090686.1-201ENST00000481577 749 ntBASIC5.05□□□□□ -1.6
PTPN9P43378 AC020890.1-201ENST00000491837 504 ntBASIC5.05□□□□□ -1.6
PTPN9P43378 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.05□□□□□ -1.6
PTPN9P43378 HPRT1P1-201ENST00000509498 657 ntBASIC5.05□□□□□ -1.6
PTPN9P43378 BTF3P13-201ENST00000513224 490 ntBASIC5.05□□□□□ -1.6
PTPN9P43378 RNA5SP303-201ENST00000516192 130 ntBASIC5.05□□□□□ -1.6
PTPN9P43378 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC5.05□□□□□ -1.6
PTPN9P43378 OR8I1P-201ENST00000529291 931 ntBASIC5.05□□□□□ -1.6
PTPN9P43378 AP000676.2-201ENST00000529711 301 ntBASIC5.05□□□□□ -1.6
PTPN9P43378 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.05□□□□□ -1.6
PTPN9P43378 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
PTPN9P43378 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC5.05□□□□□ -1.6
PTPN9P43378 AC044860.2-201ENST00000561005 179 ntBASIC5.05□□□□□ -1.6
PTPN9P43378 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.05□□□□□ -1.6
PTPN9P43378 MIR4646-201ENST00000580775 63 ntBASIC5.05□□□□□ -1.6
PTPN9P43378 MIR548Y-201ENST00000582739 110 ntBASIC5.05□□□□□ -1.6
PTPN9P43378 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.05□□□□□ -1.6
PTPN9P43378 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.05□□□□□ -1.6
PTPN9P43378 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC5.05□□□□□ -1.6
PTPN9P43378 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.05□□□□□ -1.6
PTPN9P43378 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.05□□□□□ -1.6
PTPN9P43378 Z82195.1-201ENST00000604558 398 ntBASIC5.05□□□□□ -1.6
PTPN9P43378 AL035461.2-201ENST00000619201 524 ntBASIC5.05□□□□□ -1.6
PTPN9P43378 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.05□□□□□ -1.6
PTPN9P43378 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC5.05□□□□□ -1.6
PTPN9P43378 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC5.05□□□□□ -1.6
PTPN9P43378 AC104985.3-201ENST00000623479 597 ntBASIC5.05□□□□□ -1.6
PTPN9P43378 AC097520.1-201ENST00000624435 385 ntBASIC5.05□□□□□ -1.6
PTPN9P43378 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.05□□□□□ -1.6
PTPN9P43378 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PTPN9P43378 CASC19-206ENST00000641028 1430 ntBASIC5.05□□□□□ -1.6
PTPN9P43378 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.05□□□□□ -1.6
PTPN9P43378 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PTPN9P43378 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
PTPN9P43378 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PTPN9P43378 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
PTPN9P43378 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PTPN9P43378 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PTPN9P43378 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.04□□□□□ -1.6
PTPN9P43378 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.04□□□□□ -1.6
PTPN9P43378 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.04□□□□□ -1.6
PTPN9P43378 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
PTPN9P43378 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
PTPN9P43378 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PTPN9P43378 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PTPN9P43378 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC5.04□□□□□ -1.6
PTPN9P43378 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC5.04□□□□□ -1.6
PTPN9P43378 AL645608.4-201ENST00000423619 154 ntBASIC5.04□□□□□ -1.6
PTPN9P43378 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.04□□□□□ -1.6
PTPN9P43378 OSTCP5-201ENST00000425293 453 ntBASIC5.04□□□□□ -1.6
PTPN9P43378 AC007559.1-201ENST00000428736 355 ntBASIC5.04□□□□□ -1.6
PTPN9P43378 AC022022.1-201ENST00000430304 178 ntBASIC5.04□□□□□ -1.6
PTPN9P43378 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.04□□□□□ -1.6
PTPN9P43378 RPS17P8-201ENST00000434525 335 ntBASIC5.04□□□□□ -1.6
PTPN9P43378 ELOCP11-201ENST00000436690 332 ntBASIC5.04□□□□□ -1.6
PTPN9P43378 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.04□□□□□ -1.6
PTPN9P43378 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.04□□□□□ -1.6
PTPN9P43378 ELOCP16-201ENST00000444494 332 ntBASIC5.04□□□□□ -1.6
PTPN9P43378 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC5.04□□□□□ -1.6
PTPN9P43378 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.04□□□□□ -1.6
PTPN9P43378 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.04□□□□□ -1.6
PTPN9P43378 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.04□□□□□ -1.6
PTPN9P43378 RPS4XP6-201ENST00000477670 797 ntBASIC5.04□□□□□ -1.6
PTPN9P43378 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.04□□□□□ -1.6
PTPN9P43378 RPS3AP6-201ENST00000484430 795 ntBASIC5.04□□□□□ -1.6
PTPN9P43378 RN7SL346P-201ENST00000491561 294 ntBASIC5.04□□□□□ -1.6
PTPN9P43378 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PTPN9P43378 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms