Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AP000942.1-201ENST00000463969 747 ntBASIC4.89□□□□□ -1.63
PCDH9Q9HC56 AC104164.3-201ENST00000467363 1258 ntBASIC4.89□□□□□ -1.63
PCDH9Q9HC56 RN7SL826P-201ENST00000479724 288 ntBASIC4.89□□□□□ -1.63
PCDH9Q9HC56 UBE2V1P12-201ENST00000503954 474 ntBASIC4.89□□□□□ -1.63
PCDH9Q9HC56 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.89□□□□□ -1.63
PCDH9Q9HC56 AC069306.1-201ENST00000507006 843 ntBASIC4.89□□□□□ -1.63
PCDH9Q9HC56 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.89□□□□□ -1.63
PCDH9Q9HC56 AC133963.2-201ENST00000513686 578 ntBASIC4.89□□□□□ -1.63
PCDH9Q9HC56 MTCYBP19-201ENST00000517463 1124 ntBASIC4.89□□□□□ -1.63
PCDH9Q9HC56 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.89□□□□□ -1.63
PCDH9Q9HC56 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.89□□□□□ -1.63
PCDH9Q9HC56 AP001922.4-201ENST00000526967 290 ntBASIC4.89□□□□□ -1.63
PCDH9Q9HC56 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
PCDH9Q9HC56 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.89□□□□□ -1.63
PCDH9Q9HC56 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.89□□□□□ -1.63
PCDH9Q9HC56 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.89□□□□□ -1.63
PCDH9Q9HC56 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.89□□□□□ -1.63
PCDH9Q9HC56 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.89□□□□□ -1.63
PCDH9Q9HC56 AC009117.1-201ENST00000563948 554 ntBASIC4.89□□□□□ -1.63
PCDH9Q9HC56 AC015912.2-201ENST00000571053 181 ntBASIC4.89□□□□□ -1.63
PCDH9Q9HC56 RN7SL802P-201ENST00000577858 299 ntBASIC4.89□□□□□ -1.63
PCDH9Q9HC56 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.89□□□□□ -1.63
PCDH9Q9HC56 AC068020.1-201ENST00000594215 661 ntBASIC4.89□□□□□ -1.63
PCDH9Q9HC56 AC011453.2-201ENST00000603737 729 ntBASIC4.89□□□□□ -1.63
PCDH9Q9HC56 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.89□□□□□ -1.63
PCDH9Q9HC56 RNU6-1192P-201ENST00000612197 107 ntBASIC4.89□□□□□ -1.63
PCDH9Q9HC56 RNU6-489P-201ENST00000618289 107 ntBASIC4.89□□□□□ -1.63
PCDH9Q9HC56 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.89□□□□□ -1.63
PCDH9Q9HC56 AC140113.4-201ENST00000622087 222 ntBASIC4.89□□□□□ -1.63
PCDH9Q9HC56 AC005086.4-201ENST00000623065 213 ntBASIC4.89□□□□□ -1.63
PCDH9Q9HC56 AL359757.1-201ENST00000623176 255 ntBASIC4.89□□□□□ -1.63
PCDH9Q9HC56 AC011815.3-201ENST00000624194 473 ntBASIC4.89□□□□□ -1.63
PCDH9Q9HC56 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.89□□□□□ -1.63
PCDH9Q9HC56 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.89□□□□□ -1.63
PCDH9Q9HC56 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.89□□□□□ -1.63
PCDH9Q9HC56 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.89□□□□□ -1.63
PCDH9Q9HC56 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
PCDH9Q9HC56 HSPA8P17-201ENST00000427029 1382 ntBASIC4.89□□□□□ -1.63
PCDH9Q9HC56 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.89□□□□□ -1.63
PCDH9Q9HC56 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.89□□□□□ -1.63
PCDH9Q9HC56 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
PCDH9Q9HC56 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PCDH9Q9HC56 ZFRP1-201ENST00000457579 2970 ntBASIC4.88□□□□□ -1.63
PCDH9Q9HC56 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.88□□□□□ -1.63
PCDH9Q9HC56 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.88□□□□□ -1.63
PCDH9Q9HC56 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.88□□□□□ -1.63
PCDH9Q9HC56 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.88□□□□□ -1.63
PCDH9Q9HC56 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.88□□□□□ -1.63
PCDH9Q9HC56 SNORA58B-201ENST00000364259 136 ntBASIC4.88□□□□□ -1.63
PCDH9Q9HC56 AL034403.1-201ENST00000399414 885 ntBASIC4.88□□□□□ -1.63
PCDH9Q9HC56 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
PCDH9Q9HC56 RNU2-17P-201ENST00000410290 190 ntBASIC4.88□□□□□ -1.63
PCDH9Q9HC56 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.88□□□□□ -1.63
PCDH9Q9HC56 AC114755.2-201ENST00000413520 361 ntBASIC4.88□□□□□ -1.63
PCDH9Q9HC56 XKRYP4-201ENST00000414395 483 ntBASIC4.88□□□□□ -1.63
PCDH9Q9HC56 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.88□□□□□ -1.63
PCDH9Q9HC56 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC4.88□□□□□ -1.63
PCDH9Q9HC56 TCEA1P2-201ENST00000420496 906 ntBASIC4.88□□□□□ -1.63
PCDH9Q9HC56 RPL6P5-201ENST00000445678 828 ntBASIC4.88□□□□□ -1.63
PCDH9Q9HC56 RPL31P44-201ENST00000447680 377 ntBASIC4.88□□□□□ -1.63
PCDH9Q9HC56 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
PCDH9Q9HC56 XKRYP5-201ENST00000449659 483 ntBASIC4.88□□□□□ -1.63
PCDH9Q9HC56 AURKAPS2-201ENST00000454983 333 ntBASIC4.88□□□□□ -1.63
PCDH9Q9HC56 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.88□□□□□ -1.63
PCDH9Q9HC56 DUXAP8-207ENST00000456786 622 ntBASIC4.88□□□□□ -1.63
PCDH9Q9HC56 RN7SL610P-201ENST00000463845 291 ntBASIC4.88□□□□□ -1.63
PCDH9Q9HC56 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PCDH9Q9HC56 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC4.88□□□□□ -1.63
PCDH9Q9HC56 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC4.88□□□□□ -1.63
PCDH9Q9HC56 CIR1P1-201ENST00000524055 1133 ntBASIC4.88□□□□□ -1.63
PCDH9Q9HC56 AP001372.4-201ENST00000524889 472 ntBASIC4.88□□□□□ -1.63
PCDH9Q9HC56 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.88□□□□□ -1.63
PCDH9Q9HC56 MTND1P24-201ENST00000552175 861 ntBASIC4.88□□□□□ -1.63
PCDH9Q9HC56 PCNPP1-201ENST00000552501 511 ntBASIC4.88□□□□□ -1.63
PCDH9Q9HC56 BGLT3-201ENST00000564523 994 ntBASIC4.88□□□□□ -1.63
PCDH9Q9HC56 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.88□□□□□ -1.63
PCDH9Q9HC56 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.88□□□□□ -1.63
PCDH9Q9HC56 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.88□□□□□ -1.63
PCDH9Q9HC56 AC069431.2-201ENST00000604149 1099 ntBASIC4.88□□□□□ -1.63
PCDH9Q9HC56 AC005084.1-201ENST00000605160 304 ntBASIC4.88□□□□□ -1.63
PCDH9Q9HC56 DUXAP10-204ENST00000612052 616 ntBASIC4.88□□□□□ -1.63
PCDH9Q9HC56 AC004232.3-201ENST00000622977 525 ntBASIC4.88□□□□□ -1.63
PCDH9Q9HC56 AP002967.1-201ENST00000624203 539 ntBASIC4.88□□□□□ -1.63
PCDH9Q9HC56 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC4.88□□□□□ -1.63
PCDH9Q9HC56 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PCDH9Q9HC56 AL672167.1-203ENST00000641299 2975 ntBASIC4.88□□□□□ -1.63
PCDH9Q9HC56 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PCDH9Q9HC56 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
PCDH9Q9HC56 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
PCDH9Q9HC56 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PCDH9Q9HC56 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PCDH9Q9HC56 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PCDH9Q9HC56 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
PCDH9Q9HC56 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
PCDH9Q9HC56 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
PCDH9Q9HC56 U3.30-201ENST00000391308 210 ntBASIC4.87□□□□□ -1.63
PCDH9Q9HC56 AL590762.2-201ENST00000395798 571 ntBASIC4.87□□□□□ -1.63
PCDH9Q9HC56 RPS3AP25-201ENST00000411660 793 ntBASIC4.87□□□□□ -1.63
PCDH9Q9HC56 MTCO2P8-201ENST00000412213 658 ntBASIC4.87□□□□□ -1.63
PCDH9Q9HC56 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms