Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
RFX4Q33E94 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RFX4Q33E94 ZNF137P-201ENST00000456718 1920 ntBASIC4.09□□□□□ -1.75
RFX4Q33E94 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
RFX4Q33E94 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.09□□□□□ -1.75
RFX4Q33E94 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.09□□□□□ -1.75
RFX4Q33E94 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RFX4Q33E94 RN7SKP149-201ENST00000363008 344 ntBASIC4.09□□□□□ -1.75
RFX4Q33E94 RNA5SP513-201ENST00000364648 118 ntBASIC4.09□□□□□ -1.75
RFX4Q33E94 SNORA51.8-201ENST00000384234 132 ntBASIC4.09□□□□□ -1.75
RFX4Q33E94 MIR1911-201ENST00000410783 80 ntBASIC4.09□□□□□ -1.75
RFX4Q33E94 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.09□□□□□ -1.75
RFX4Q33E94 BX510359.2-201ENST00000417920 305 ntBASIC4.09□□□□□ -1.75
RFX4Q33E94 AC092647.1-201ENST00000420654 287 ntBASIC4.09□□□□□ -1.75
RFX4Q33E94 AC004074.1-201ENST00000421810 1063 ntBASIC4.09□□□□□ -1.75
RFX4Q33E94 AC007064.3-201ENST00000422608 359 ntBASIC4.09□□□□□ -1.75
RFX4Q33E94 AL158073.1-201ENST00000426848 1104 ntBASIC4.09□□□□□ -1.75
RFX4Q33E94 RPS20P1-201ENST00000434853 354 ntBASIC4.09□□□□□ -1.75
RFX4Q33E94 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.09□□□□□ -1.75
RFX4Q33E94 AC005154.2-201ENST00000438110 379 ntBASIC4.09□□□□□ -1.75
RFX4Q33E94 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.09□□□□□ -1.75
RFX4Q33E94 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.09□□□□□ -1.75
RFX4Q33E94 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.09□□□□□ -1.75
RFX4Q33E94 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.09□□□□□ -1.75
RFX4Q33E94 AC063943.1-201ENST00000465434 453 ntBASIC4.09□□□□□ -1.75
RFX4Q33E94 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.09□□□□□ -1.75
RFX4Q33E94 AL049874.4-201ENST00000557593 255 ntBASIC4.09□□□□□ -1.75
RFX4Q33E94 AC009117.1-201ENST00000563948 554 ntBASIC4.09□□□□□ -1.75
RFX4Q33E94 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.09□□□□□ -1.75
RFX4Q33E94 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.09□□□□□ -1.75
RFX4Q33E94 AL512782.1-201ENST00000603093 364 ntBASIC4.09□□□□□ -1.75
RFX4Q33E94 AC005034.4-201ENST00000603612 899 ntBASIC4.09□□□□□ -1.75
RFX4Q33E94 AL160290.3-201ENST00000604869 165 ntBASIC4.09□□□□□ -1.75
RFX4Q33E94 AC079791.1-201ENST00000605356 973 ntBASIC4.09□□□□□ -1.75
RFX4Q33E94 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.09□□□□□ -1.75
RFX4Q33E94 AC015922.4-201ENST00000612568 690 ntBASIC4.09□□□□□ -1.75
RFX4Q33E94 AL356274.1-201ENST00000617064 410 ntBASIC4.09□□□□□ -1.75
RFX4Q33E94 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.09□□□□□ -1.75
RFX4Q33E94 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.09□□□□□ -1.75
RFX4Q33E94 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RFX4Q33E94 AC074029.4-201ENST00000624796 1859 ntBASIC4.09□□□□□ -1.76
RFX4Q33E94 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
RFX4Q33E94 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
RFX4Q33E94 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.08□□□□□ -1.76
RFX4Q33E94 MFSD8-242ENST00000641690 4199 ntBASIC4.08□□□□□ -1.76
RFX4Q33E94 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.08□□□□□ -1.76
RFX4Q33E94 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.08□□□□□ -1.76
RFX4Q33E94 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RFX4Q33E94 RNU6-386P-201ENST00000362650 107 ntBASIC4.08□□□□□ -1.76
RFX4Q33E94 SNORA71.2-201ENST00000364941 134 ntBASIC4.08□□□□□ -1.76
RFX4Q33E94 MIR105-2-201ENST00000385083 81 ntBASIC4.08□□□□□ -1.76
RFX4Q33E94 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
RFX4Q33E94 AL645927.1-201ENST00000396783 406 ntBASIC4.08□□□□□ -1.76
RFX4Q33E94 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.08□□□□□ -1.76
RFX4Q33E94 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.08□□□□□ -1.76
RFX4Q33E94 RN7SKP100-201ENST00000411258 284 ntBASIC4.08□□□□□ -1.76
RFX4Q33E94 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.08□□□□□ -1.76
RFX4Q33E94 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.08□□□□□ -1.76
RFX4Q33E94 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RFX4Q33E94 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.08□□□□□ -1.76
RFX4Q33E94 XKRYP6-201ENST00000440468 1116 ntBASIC4.08□□□□□ -1.76
RFX4Q33E94 XKRYP3-201ENST00000442113 1116 ntBASIC4.08□□□□□ -1.76
RFX4Q33E94 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC4.08□□□□□ -1.76
RFX4Q33E94 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.08□□□□□ -1.76
RFX4Q33E94 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RFX4Q33E94 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.08□□□□□ -1.76
RFX4Q33E94 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.08□□□□□ -1.76
RFX4Q33E94 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.08□□□□□ -1.76
RFX4Q33E94 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RFX4Q33E94 AP000676.2-201ENST00000529711 301 ntBASIC4.08□□□□□ -1.76
RFX4Q33E94 AC090017.1-201ENST00000548612 1779 ntBASIC4.08□□□□□ -1.76
RFX4Q33E94 AC090515.3-201ENST00000560431 315 ntBASIC4.08□□□□□ -1.76
RFX4Q33E94 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.08□□□□□ -1.76
RFX4Q33E94 AC018552.3-201ENST00000567416 561 ntBASIC4.08□□□□□ -1.76
RFX4Q33E94 MIR4646-201ENST00000580775 63 ntBASIC4.08□□□□□ -1.76
RFX4Q33E94 MIR3667-201ENST00000581025 74 ntBASIC4.08□□□□□ -1.76
RFX4Q33E94 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.08□□□□□ -1.76
RFX4Q33E94 MIR6853-201ENST00000619642 74 ntBASIC4.08□□□□□ -1.76
RFX4Q33E94 AC087385.3-201ENST00000620477 187 ntBASIC4.08□□□□□ -1.76
RFX4Q33E94 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.08□□□□□ -1.76
RFX4Q33E94 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.08□□□□□ -1.76
RFX4Q33E94 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC4.08□□□□□ -1.76
RFX4Q33E94 AC016588.2-201ENST00000632484 3021 ntBASIC4.08□□□□□ -1.76
RFX4Q33E94 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.08□□□□□ -1.76
RFX4Q33E94 OR10AB1P-202ENST00000641219 1686 ntBASIC4.08□□□□□ -1.76
RFX4Q33E94 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.08□□□□□ -1.76
RFX4Q33E94 AL445437.1-201ENST00000623157 3087 ntBASIC4.08□□□□□ -1.76
RFX4Q33E94 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.07□□□□□ -1.76
RFX4Q33E94 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.07□□□□□ -1.76
RFX4Q33E94 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
RFX4Q33E94 AC018555.1-201ENST00000567548 1980 ntBASIC4.07□□□□□ -1.76
RFX4Q33E94 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.07□□□□□ -1.76
RFX4Q33E94 IQCB2P-201ENST00000401788 1633 ntBASIC4.07□□□□□ -1.76
RFX4Q33E94 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
RFX4Q33E94 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
RFX4Q33E94 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.07□□□□□ -1.76
RFX4Q33E94 A2MP1-204ENST00000566278 4130 ntBASIC4.07□□□□□ -1.76
RFX4Q33E94 AP000756.2-201ENST00000624168 2567 ntBASIC4.07□□□□□ -1.76
RFX4Q33E94 RNA5SP105-201ENST00000391123 113 ntBASIC4.07□□□□□ -1.76
RFX4Q33E94 RNA5SP306-201ENST00000411087 107 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms