Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AL450489.1-201ENST00000612071 468 ntBASIC5.31□□□□□ -1.56
PHGDHO43175 AC023158.2-201ENST00000614876 543 ntBASIC5.31□□□□□ -1.56
PHGDHO43175 AC090246.1-201ENST00000616499 426 ntBASIC5.31□□□□□ -1.56
PHGDHO43175 AC015804.1-201ENST00000622935 435 ntBASIC5.31□□□□□ -1.56
PHGDHO43175 AC132068.1-201ENST00000623805 459 ntBASIC5.31□□□□□ -1.56
PHGDHO43175 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC5.31□□□□□ -1.56
PHGDHO43175 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
PHGDHO43175 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PHGDHO43175 AL353743.4-201ENST00000422653 1547 ntBASIC5.31□□□□□ -1.56
PHGDHO43175 CASC19-204ENST00000641001 2055 ntBASIC5.31□□□□□ -1.56
PHGDHO43175 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
PHGDHO43175 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PHGDHO43175 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PHGDHO43175 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
PHGDHO43175 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
PHGDHO43175 AC134882.1-201ENST00000603738 1676 ntBASIC5.31□□□□□ -1.56
PHGDHO43175 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
PHGDHO43175 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PHGDHO43175 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PHGDHO43175 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PHGDHO43175 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PHGDHO43175 AC019072.1-201ENST00000604535 1551 ntBASIC5.3□□□□□ -1.56
PHGDHO43175 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PHGDHO43175 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.3□□□□□ -1.56
PHGDHO43175 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
PHGDHO43175 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.3□□□□□ -1.56
PHGDHO43175 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PHGDHO43175 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
PHGDHO43175 RN7SKP292-201ENST00000365522 317 ntBASIC5.3□□□□□ -1.56
PHGDHO43175 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PHGDHO43175 RNU1-74P-201ENST00000384108 171 ntBASIC5.3□□□□□ -1.56
PHGDHO43175 MIR217-201ENST00000384817 110 ntBASIC5.3□□□□□ -1.56
PHGDHO43175 AL161909.1-201ENST00000397390 712 ntBASIC5.3□□□□□ -1.56
PHGDHO43175 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
PHGDHO43175 MIR1282-201ENST00000408865 101 ntBASIC5.3□□□□□ -1.56
PHGDHO43175 RNA5SP80-201ENST00000410475 111 ntBASIC5.3□□□□□ -1.56
PHGDHO43175 NPM1P40-201ENST00000412758 733 ntBASIC5.3□□□□□ -1.56
PHGDHO43175 BMS1P17-202ENST00000416720 316 ntBASIC5.3□□□□□ -1.56
PHGDHO43175 PTP4A1P5-201ENST00000420305 455 ntBASIC5.3□□□□□ -1.56
PHGDHO43175 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.3□□□□□ -1.56
PHGDHO43175 OFD1P2Y-201ENST00000421895 1149 ntBASIC5.3□□□□□ -1.56
PHGDHO43175 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.3□□□□□ -1.56
PHGDHO43175 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC5.3□□□□□ -1.56
PHGDHO43175 Z93242.1-201ENST00000427102 353 ntBASIC5.3□□□□□ -1.56
PHGDHO43175 AC124944.2-201ENST00000429866 1242 ntBASIC5.3□□□□□ -1.56
PHGDHO43175 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC5.3□□□□□ -1.56
PHGDHO43175 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.3□□□□□ -1.56
PHGDHO43175 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
PHGDHO43175 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC5.3□□□□□ -1.56
PHGDHO43175 RPL36AP39-201ENST00000445859 318 ntBASIC5.3□□□□□ -1.56
PHGDHO43175 MTCO2P25-201ENST00000447065 681 ntBASIC5.3□□□□□ -1.56
PHGDHO43175 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PHGDHO43175 NPM1P19-201ENST00000450070 712 ntBASIC5.3□□□□□ -1.56
PHGDHO43175 AL672138.1-201ENST00000450604 1015 ntBASIC5.3□□□□□ -1.56
PHGDHO43175 PRPF38AP1-201ENST00000451976 933 ntBASIC5.3□□□□□ -1.56
PHGDHO43175 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.3□□□□□ -1.56
PHGDHO43175 RFC5P1-201ENST00000454419 874 ntBASIC5.3□□□□□ -1.56
PHGDHO43175 AL122001.1-201ENST00000457027 370 ntBASIC5.3□□□□□ -1.56
PHGDHO43175 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC5.3□□□□□ -1.56
PHGDHO43175 RPL7AP10-201ENST00000481016 791 ntBASIC5.3□□□□□ -1.56
PHGDHO43175 AC058823.1-201ENST00000485315 474 ntBASIC5.3□□□□□ -1.56
PHGDHO43175 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC5.3□□□□□ -1.56
PHGDHO43175 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.3□□□□□ -1.56
PHGDHO43175 AC011352.3-201ENST00000505162 593 ntBASIC5.3□□□□□ -1.56
PHGDHO43175 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC5.3□□□□□ -1.56
PHGDHO43175 MTCYBP16-201ENST00000509187 1129 ntBASIC5.3□□□□□ -1.56
PHGDHO43175 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.3□□□□□ -1.56
PHGDHO43175 EIF3KP3-201ENST00000514461 639 ntBASIC5.3□□□□□ -1.56
PHGDHO43175 SNORD46.2-201ENST00000516021 102 ntBASIC5.3□□□□□ -1.56
PHGDHO43175 RNA5SP135-201ENST00000517019 125 ntBASIC5.3□□□□□ -1.56
PHGDHO43175 FTH1P11-201ENST00000517577 551 ntBASIC5.3□□□□□ -1.56
PHGDHO43175 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.3□□□□□ -1.56
PHGDHO43175 NRBF2P4-201ENST00000520874 850 ntBASIC5.3□□□□□ -1.56
PHGDHO43175 HIGD1AP6-201ENST00000521833 279 ntBASIC5.3□□□□□ -1.56
PHGDHO43175 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.3□□□□□ -1.56
PHGDHO43175 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.3□□□□□ -1.56
PHGDHO43175 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.3□□□□□ -1.56
PHGDHO43175 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
PHGDHO43175 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC5.3□□□□□ -1.56
PHGDHO43175 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC5.3□□□□□ -1.56
PHGDHO43175 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PHGDHO43175 AL109653.1-201ENST00000603091 248 ntBASIC5.3□□□□□ -1.56
PHGDHO43175 AC018638.7-201ENST00000605836 1114 ntBASIC5.3□□□□□ -1.56
PHGDHO43175 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PHGDHO43175 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PHGDHO43175 AC109583.2-201ENST00000617367 129 ntBASIC5.3□□□□□ -1.56
PHGDHO43175 MIR6861-201ENST00000618657 64 ntBASIC5.3□□□□□ -1.56
PHGDHO43175 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.3□□□□□ -1.56
PHGDHO43175 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
PHGDHO43175 MIR6839-201ENST00000620425 113 ntBASIC5.3□□□□□ -1.56
PHGDHO43175 AP000676.3-201ENST00000623299 569 ntBASIC5.3□□□□□ -1.56
PHGDHO43175 AC124312.6-202ENST00000623624 418 ntBASIC5.3□□□□□ -1.56
PHGDHO43175 CU639417.4-201ENST00000623928 207 ntBASIC5.3□□□□□ -1.56
PHGDHO43175 MIR4278-201ENST00000636094 69 ntBASIC5.3□□□□□ -1.56
PHGDHO43175 MIR1910-201ENST00000636955 80 ntBASIC5.3□□□□□ -1.56
PHGDHO43175 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PHGDHO43175 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.3□□□□□ -1.56
PHGDHO43175 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
PHGDHO43175 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PHGDHO43175 Z95331.1-201ENST00000623075 23112 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 138.7 ms