Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PdfS4R2K0 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PdfS4R2K0 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PdfS4R2K0 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PdfS4R2K0 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
PdfS4R2K0 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PdfS4R2K0 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
PdfS4R2K0 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
PdfS4R2K0 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PdfS4R2K0 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PdfS4R2K0 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.79□□□□□ -0.36
PdfS4R2K0 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PdfS4R2K0 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PdfS4R2K0 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PdfS4R2K0 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PdfS4R2K0 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PdfS4R2K0 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
PdfS4R2K0 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PdfS4R2K0 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PdfS4R2K0 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PdfS4R2K0 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
PdfS4R2K0 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PdfS4R2K0 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
PdfS4R2K0 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PdfS4R2K0 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PdfS4R2K0 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PdfS4R2K0 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PdfS4R2K0 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PdfS4R2K0 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC12.78□□□□□ -0.36
PdfS4R2K0 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
PdfS4R2K0 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PdfS4R2K0 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC12.78□□□□□ -0.36
PdfS4R2K0 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PdfS4R2K0 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PdfS4R2K0 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PdfS4R2K0 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PdfS4R2K0 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
PdfS4R2K0 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
PdfS4R2K0 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PdfS4R2K0 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC12.78□□□□□ -0.36
PdfS4R2K0 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC12.78□□□□□ -0.36
PdfS4R2K0 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PdfS4R2K0 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PdfS4R2K0 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PdfS4R2K0 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.78□□□□□ -0.36
PdfS4R2K0 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC12.78□□□□□ -0.36
PdfS4R2K0 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PdfS4R2K0 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
PdfS4R2K0 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PdfS4R2K0 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PdfS4R2K0 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
PdfS4R2K0 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PdfS4R2K0 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
PdfS4R2K0 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
PdfS4R2K0 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
PdfS4R2K0 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
PdfS4R2K0 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
PdfS4R2K0 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
PdfS4R2K0 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
PdfS4R2K0 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
PdfS4R2K0 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
PdfS4R2K0 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
PdfS4R2K0 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC12.77□□□□□ -0.36
PdfS4R2K0 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
PdfS4R2K0 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC12.77□□□□□ -0.37
PdfS4R2K0 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
PdfS4R2K0 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PdfS4R2K0 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PdfS4R2K0 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC12.77□□□□□ -0.37
PdfS4R2K0 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PdfS4R2K0 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PdfS4R2K0 Gm8520-201ENSMUST00000186517 868 ntBASIC12.77□□□□□ -0.37
PdfS4R2K0 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PdfS4R2K0 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
PdfS4R2K0 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
PdfS4R2K0 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
PdfS4R2K0 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PdfS4R2K0 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PdfS4R2K0 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PdfS4R2K0 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PdfS4R2K0 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PdfS4R2K0 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PdfS4R2K0 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
PdfS4R2K0 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
PdfS4R2K0 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PdfS4R2K0 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
PdfS4R2K0 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
PdfS4R2K0 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
PdfS4R2K0 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
PdfS4R2K0 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PdfS4R2K0 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC12.76□□□□□ -0.37
PdfS4R2K0 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
PdfS4R2K0 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
PdfS4R2K0 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PdfS4R2K0 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC12.76□□□□□ -0.37
PdfS4R2K0 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
PdfS4R2K0 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PdfS4R2K0 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PdfS4R2K0 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PdfS4R2K0 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms