Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
H2afb2S4R1M3 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
H2afb2S4R1M3 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
H2afb2S4R1M3 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.63■□□□□ 0.25
H2afb2S4R1M3 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.63■□□□□ 0.25
H2afb2S4R1M3 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.63■□□□□ 0.25
H2afb2S4R1M3 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
H2afb2S4R1M3 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
H2afb2S4R1M3 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
H2afb2S4R1M3 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.63■□□□□ 0.25
H2afb2S4R1M3 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
H2afb2S4R1M3 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
H2afb2S4R1M3 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
H2afb2S4R1M3 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
H2afb2S4R1M3 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
H2afb2S4R1M3 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
H2afb2S4R1M3 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
H2afb2S4R1M3 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
H2afb2S4R1M3 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
H2afb2S4R1M3 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
H2afb2S4R1M3 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
H2afb2S4R1M3 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
H2afb2S4R1M3 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
H2afb2S4R1M3 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
H2afb2S4R1M3 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
H2afb2S4R1M3 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.62■□□□□ 0.25
H2afb2S4R1M3 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
H2afb2S4R1M3 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
H2afb2S4R1M3 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
H2afb2S4R1M3 Phf7-203ENSMUST00000226565 1971 ntBASIC16.62■□□□□ 0.25
H2afb2S4R1M3 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
H2afb2S4R1M3 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
H2afb2S4R1M3 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
H2afb2S4R1M3 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
H2afb2S4R1M3 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
H2afb2S4R1M3 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
H2afb2S4R1M3 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
H2afb2S4R1M3 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
H2afb2S4R1M3 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
H2afb2S4R1M3 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
H2afb2S4R1M3 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
H2afb2S4R1M3 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
H2afb2S4R1M3 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
H2afb2S4R1M3 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
H2afb2S4R1M3 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
H2afb2S4R1M3 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
H2afb2S4R1M3 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
H2afb2S4R1M3 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
H2afb2S4R1M3 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.61■□□□□ 0.25
H2afb2S4R1M3 Gm43799-201ENSMUST00000201845 579 ntBASIC16.61■□□□□ 0.25
H2afb2S4R1M3 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
H2afb2S4R1M3 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
H2afb2S4R1M3 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
H2afb2S4R1M3 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.61■□□□□ 0.25
H2afb2S4R1M3 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
H2afb2S4R1M3 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
H2afb2S4R1M3 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
H2afb2S4R1M3 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
H2afb2S4R1M3 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
H2afb2S4R1M3 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
H2afb2S4R1M3 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
H2afb2S4R1M3 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
H2afb2S4R1M3 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
H2afb2S4R1M3 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
H2afb2S4R1M3 Actl10-202ENSMUST00000226583 1501 ntBASIC16.6■□□□□ 0.25
H2afb2S4R1M3 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.6■□□□□ 0.25
H2afb2S4R1M3 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
H2afb2S4R1M3 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
H2afb2S4R1M3 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
H2afb2S4R1M3 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
H2afb2S4R1M3 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
H2afb2S4R1M3 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
H2afb2S4R1M3 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
H2afb2S4R1M3 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
H2afb2S4R1M3 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
H2afb2S4R1M3 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
H2afb2S4R1M3 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
H2afb2S4R1M3 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
H2afb2S4R1M3 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
H2afb2S4R1M3 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
H2afb2S4R1M3 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.6■□□□□ 0.25
H2afb2S4R1M3 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.6■□□□□ 0.25
H2afb2S4R1M3 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.6■□□□□ 0.25
H2afb2S4R1M3 Gm7213-201ENSMUST00000215977 950 ntBASIC16.6■□□□□ 0.25
H2afb2S4R1M3 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
H2afb2S4R1M3 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
H2afb2S4R1M3 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.6■□□□□ 0.25
H2afb2S4R1M3 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
H2afb2S4R1M3 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
H2afb2S4R1M3 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
H2afb2S4R1M3 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
H2afb2S4R1M3 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
H2afb2S4R1M3 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
H2afb2S4R1M3 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
H2afb2S4R1M3 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.59■□□□□ 0.25
H2afb2S4R1M3 Mir6982-201ENSMUST00000184354 68 ntBASIC16.59■□□□□ 0.25
H2afb2S4R1M3 Gm18115-201ENSMUST00000221209 621 ntBASIC16.59■□□□□ 0.25
H2afb2S4R1M3 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
H2afb2S4R1M3 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
H2afb2S4R1M3 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms