Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ClcnkaQ9WUB7 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ClcnkaQ9WUB7 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ClcnkaQ9WUB7 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ClcnkaQ9WUB7 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
ClcnkaQ9WUB7 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ClcnkaQ9WUB7 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ClcnkaQ9WUB7 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
ClcnkaQ9WUB7 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ClcnkaQ9WUB7 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ClcnkaQ9WUB7 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.3■□□□□ 0.04
ClcnkaQ9WUB7 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
ClcnkaQ9WUB7 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
ClcnkaQ9WUB7 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
ClcnkaQ9WUB7 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ClcnkaQ9WUB7 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ClcnkaQ9WUB7 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ClcnkaQ9WUB7 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ClcnkaQ9WUB7 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
ClcnkaQ9WUB7 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ClcnkaQ9WUB7 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ClcnkaQ9WUB7 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
ClcnkaQ9WUB7 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
ClcnkaQ9WUB7 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC15.29■□□□□ 0.04
ClcnkaQ9WUB7 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ClcnkaQ9WUB7 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15.29■□□□□ 0.04
ClcnkaQ9WUB7 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ClcnkaQ9WUB7 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
ClcnkaQ9WUB7 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.29■□□□□ 0.04
ClcnkaQ9WUB7 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
ClcnkaQ9WUB7 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC15.29■□□□□ 0.04
ClcnkaQ9WUB7 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ClcnkaQ9WUB7 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
ClcnkaQ9WUB7 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
ClcnkaQ9WUB7 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ClcnkaQ9WUB7 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ClcnkaQ9WUB7 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
ClcnkaQ9WUB7 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
ClcnkaQ9WUB7 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ClcnkaQ9WUB7 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ClcnkaQ9WUB7 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ClcnkaQ9WUB7 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ClcnkaQ9WUB7 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.29■□□□□ 0.04
ClcnkaQ9WUB7 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ClcnkaQ9WUB7 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ClcnkaQ9WUB7 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
ClcnkaQ9WUB7 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ClcnkaQ9WUB7 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ClcnkaQ9WUB7 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ClcnkaQ9WUB7 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
ClcnkaQ9WUB7 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ClcnkaQ9WUB7 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ClcnkaQ9WUB7 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ClcnkaQ9WUB7 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
ClcnkaQ9WUB7 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ClcnkaQ9WUB7 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
ClcnkaQ9WUB7 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ClcnkaQ9WUB7 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.28■□□□□ 0.04
ClcnkaQ9WUB7 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ClcnkaQ9WUB7 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ClcnkaQ9WUB7 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
ClcnkaQ9WUB7 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC15.28■□□□□ 0.04
ClcnkaQ9WUB7 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ClcnkaQ9WUB7 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ClcnkaQ9WUB7 AC153881.2-201ENSMUST00000214877 204 ntBASIC15.28■□□□□ 0.04
ClcnkaQ9WUB7 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ClcnkaQ9WUB7 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ClcnkaQ9WUB7 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ClcnkaQ9WUB7 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.28■□□□□ 0.04
ClcnkaQ9WUB7 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ClcnkaQ9WUB7 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ClcnkaQ9WUB7 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ClcnkaQ9WUB7 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ClcnkaQ9WUB7 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ClcnkaQ9WUB7 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ClcnkaQ9WUB7 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ClcnkaQ9WUB7 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ClcnkaQ9WUB7 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ClcnkaQ9WUB7 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ClcnkaQ9WUB7 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.27■□□□□ 0.04
ClcnkaQ9WUB7 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
ClcnkaQ9WUB7 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ClcnkaQ9WUB7 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
ClcnkaQ9WUB7 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ClcnkaQ9WUB7 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
ClcnkaQ9WUB7 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ClcnkaQ9WUB7 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
ClcnkaQ9WUB7 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
ClcnkaQ9WUB7 Gm7889-201ENSMUST00000185591 958 ntBASIC15.27■□□□□ 0.04
ClcnkaQ9WUB7 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
ClcnkaQ9WUB7 Gm7370-201ENSMUST00000219471 767 ntBASIC15.27■□□□□ 0.04
ClcnkaQ9WUB7 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
ClcnkaQ9WUB7 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ClcnkaQ9WUB7 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ClcnkaQ9WUB7 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ClcnkaQ9WUB7 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ClcnkaQ9WUB7 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
ClcnkaQ9WUB7 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ClcnkaQ9WUB7 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
ClcnkaQ9WUB7 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms