Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn8aQ9WTU3 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn8aQ9WTU3 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.69■□□□□ 0.26
Scn8aQ9WTU3 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn8aQ9WTU3 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn8aQ9WTU3 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn8aQ9WTU3 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Scn8aQ9WTU3 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn8aQ9WTU3 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Scn8aQ9WTU3 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn8aQ9WTU3 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn8aQ9WTU3 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Scn8aQ9WTU3 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Scn8aQ9WTU3 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn8aQ9WTU3 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.68■□□□□ 0.26
Scn8aQ9WTU3 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn8aQ9WTU3 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn8aQ9WTU3 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn8aQ9WTU3 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn8aQ9WTU3 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn8aQ9WTU3 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn8aQ9WTU3 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.68■□□□□ 0.26
Scn8aQ9WTU3 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn8aQ9WTU3 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn8aQ9WTU3 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Scn8aQ9WTU3 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn8aQ9WTU3 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn8aQ9WTU3 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.68■□□□□ 0.26
Scn8aQ9WTU3 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Scn8aQ9WTU3 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.68■□□□□ 0.26
Scn8aQ9WTU3 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.68■□□□□ 0.26
Scn8aQ9WTU3 Gm27867-201ENSMUST00000184778 125 ntBASIC16.68■□□□□ 0.26
Scn8aQ9WTU3 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn8aQ9WTU3 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn8aQ9WTU3 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn8aQ9WTU3 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Scn8aQ9WTU3 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.67■□□□□ 0.26
Scn8aQ9WTU3 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
Scn8aQ9WTU3 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
Scn8aQ9WTU3 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
Scn8aQ9WTU3 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.67■□□□□ 0.26
Scn8aQ9WTU3 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.67■□□□□ 0.26
Scn8aQ9WTU3 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn8aQ9WTU3 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn8aQ9WTU3 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn8aQ9WTU3 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
Scn8aQ9WTU3 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.67■□□□□ 0.26
Scn8aQ9WTU3 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn8aQ9WTU3 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Scn8aQ9WTU3 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn8aQ9WTU3 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn8aQ9WTU3 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Scn8aQ9WTU3 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.66■□□□□ 0.26
Scn8aQ9WTU3 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Scn8aQ9WTU3 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.66■□□□□ 0.26
Scn8aQ9WTU3 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn8aQ9WTU3 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Scn8aQ9WTU3 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn8aQ9WTU3 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn8aQ9WTU3 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn8aQ9WTU3 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn8aQ9WTU3 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Scn8aQ9WTU3 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn8aQ9WTU3 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn8aQ9WTU3 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn8aQ9WTU3 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn8aQ9WTU3 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.66■□□□□ 0.26
Scn8aQ9WTU3 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Scn8aQ9WTU3 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.66■□□□□ 0.26
Scn8aQ9WTU3 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn8aQ9WTU3 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn8aQ9WTU3 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn8aQ9WTU3 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.65■□□□□ 0.26
Scn8aQ9WTU3 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn8aQ9WTU3 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn8aQ9WTU3 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
Scn8aQ9WTU3 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn8aQ9WTU3 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Scn8aQ9WTU3 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn8aQ9WTU3 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Scn8aQ9WTU3 Gm27459-201ENSMUST00000184860 107 ntBASIC16.65■□□□□ 0.26
Scn8aQ9WTU3 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Scn8aQ9WTU3 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Scn8aQ9WTU3 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Scn8aQ9WTU3 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn8aQ9WTU3 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Scn8aQ9WTU3 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Scn8aQ9WTU3 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn8aQ9WTU3 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn8aQ9WTU3 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Scn8aQ9WTU3 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Scn8aQ9WTU3 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn8aQ9WTU3 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Scn8aQ9WTU3 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.64■□□□□ 0.25
Scn8aQ9WTU3 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.64■□□□□ 0.25
Scn8aQ9WTU3 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC16.64■□□□□ 0.25
Scn8aQ9WTU3 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.64■□□□□ 0.25
Scn8aQ9WTU3 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn8aQ9WTU3 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn8aQ9WTU3 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms