Protein–RNA interactions for Protein: Q9WTN0

Ggps1, Geranylgeranyl pyrophosphate synthase, mousemouse

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ggps1Q9WTN0 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ggps1Q9WTN0 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Ggps1Q9WTN0 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ggps1Q9WTN0 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ggps1Q9WTN0 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ggps1Q9WTN0 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ggps1Q9WTN0 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Ggps1Q9WTN0 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ggps1Q9WTN0 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ggps1Q9WTN0 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ggps1Q9WTN0 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ggps1Q9WTN0 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ggps1Q9WTN0 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ggps1Q9WTN0 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ggps1Q9WTN0 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ggps1Q9WTN0 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Ggps1Q9WTN0 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC18.39■□□□□ 0.53
Ggps1Q9WTN0 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Ggps1Q9WTN0 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.53
Ggps1Q9WTN0 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.53
Ggps1Q9WTN0 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ggps1Q9WTN0 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ggps1Q9WTN0 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ggps1Q9WTN0 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.39■□□□□ 0.53
Ggps1Q9WTN0 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ggps1Q9WTN0 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ggps1Q9WTN0 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC18.38■□□□□ 0.53
Ggps1Q9WTN0 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ggps1Q9WTN0 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ggps1Q9WTN0 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ggps1Q9WTN0 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC18.38■□□□□ 0.53
Ggps1Q9WTN0 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC18.38■□□□□ 0.53
Ggps1Q9WTN0 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
Ggps1Q9WTN0 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ggps1Q9WTN0 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Ggps1Q9WTN0 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ggps1Q9WTN0 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ggps1Q9WTN0 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ggps1Q9WTN0 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ggps1Q9WTN0 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
Ggps1Q9WTN0 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ggps1Q9WTN0 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ggps1Q9WTN0 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ggps1Q9WTN0 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Ggps1Q9WTN0 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ggps1Q9WTN0 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ggps1Q9WTN0 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ggps1Q9WTN0 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ggps1Q9WTN0 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ggps1Q9WTN0 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.37■□□□□ 0.53
Ggps1Q9WTN0 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ggps1Q9WTN0 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ggps1Q9WTN0 Gm15165-201ENSMUST00000118140 502 ntBASIC18.37■□□□□ 0.53
Ggps1Q9WTN0 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ggps1Q9WTN0 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ggps1Q9WTN0 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ggps1Q9WTN0 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ggps1Q9WTN0 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC18.37■□□□□ 0.53
Ggps1Q9WTN0 AC107711.5-202ENSMUST00000226429 702 ntBASIC18.37■□□□□ 0.53
Ggps1Q9WTN0 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ggps1Q9WTN0 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ggps1Q9WTN0 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ggps1Q9WTN0 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.37■□□□□ 0.53
Ggps1Q9WTN0 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ggps1Q9WTN0 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.37■□□□□ 0.53
Ggps1Q9WTN0 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ggps1Q9WTN0 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ggps1Q9WTN0 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ggps1Q9WTN0 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ggps1Q9WTN0 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ggps1Q9WTN0 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Ggps1Q9WTN0 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ggps1Q9WTN0 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ggps1Q9WTN0 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ggps1Q9WTN0 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ggps1Q9WTN0 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ggps1Q9WTN0 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Ggps1Q9WTN0 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ggps1Q9WTN0 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ggps1Q9WTN0 Gm44454-201ENSMUST00000198541 138 ntBASIC18.36■□□□□ 0.53
Ggps1Q9WTN0 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.36■□□□□ 0.53
Ggps1Q9WTN0 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC18.36■□□□□ 0.53
Ggps1Q9WTN0 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC18.36■□□□□ 0.53
Ggps1Q9WTN0 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ggps1Q9WTN0 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ggps1Q9WTN0 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ggps1Q9WTN0 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ggps1Q9WTN0 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ggps1Q9WTN0 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ggps1Q9WTN0 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ggps1Q9WTN0 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ggps1Q9WTN0 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ggps1Q9WTN0 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ggps1Q9WTN0 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC18.35■□□□□ 0.53
Ggps1Q9WTN0 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ggps1Q9WTN0 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Ggps1Q9WTN0 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC18.35■□□□□ 0.53
Ggps1Q9WTN0 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC18.35■□□□□ 0.53
Ggps1Q9WTN0 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ggps1Q9WTN0 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms