Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Nubp1Q9R060 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nubp1Q9R060 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nubp1Q9R060 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nubp1Q9R060 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Nubp1Q9R060 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nubp1Q9R060 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Nubp1Q9R060 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nubp1Q9R060 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nubp1Q9R060 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC14.53□□□□□ -0.08
Nubp1Q9R060 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.08
Nubp1Q9R060 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nubp1Q9R060 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Nubp1Q9R060 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nubp1Q9R060 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nubp1Q9R060 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nubp1Q9R060 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Nubp1Q9R060 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Nubp1Q9R060 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Nubp1Q9R060 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nubp1Q9R060 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.52□□□□□ -0.09
Nubp1Q9R060 Rprl3-201ENSMUST00000157400 290 ntBASIC14.52□□□□□ -0.09
Nubp1Q9R060 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.52□□□□□ -0.09
Nubp1Q9R060 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nubp1Q9R060 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.52□□□□□ -0.09
Nubp1Q9R060 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nubp1Q9R060 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.52□□□□□ -0.09
Nubp1Q9R060 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nubp1Q9R060 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nubp1Q9R060 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nubp1Q9R060 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC14.52□□□□□ -0.09
Nubp1Q9R060 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nubp1Q9R060 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nubp1Q9R060 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nubp1Q9R060 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nubp1Q9R060 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nubp1Q9R060 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nubp1Q9R060 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC14.51□□□□□ -0.09
Nubp1Q9R060 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nubp1Q9R060 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nubp1Q9R060 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nubp1Q9R060 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nubp1Q9R060 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Nubp1Q9R060 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nubp1Q9R060 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nubp1Q9R060 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Nubp1Q9R060 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nubp1Q9R060 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.51□□□□□ -0.09
Nubp1Q9R060 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.51□□□□□ -0.09
Nubp1Q9R060 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nubp1Q9R060 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Nubp1Q9R060 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nubp1Q9R060 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nubp1Q9R060 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nubp1Q9R060 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Nubp1Q9R060 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nubp1Q9R060 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nubp1Q9R060 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nubp1Q9R060 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nubp1Q9R060 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nubp1Q9R060 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nubp1Q9R060 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nubp1Q9R060 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nubp1Q9R060 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.51□□□□□ -0.09
Nubp1Q9R060 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nubp1Q9R060 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Nubp1Q9R060 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Nubp1Q9R060 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nubp1Q9R060 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nubp1Q9R060 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nubp1Q9R060 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
Nubp1Q9R060 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nubp1Q9R060 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.5□□□□□ -0.09
Nubp1Q9R060 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Nubp1Q9R060 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nubp1Q9R060 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nubp1Q9R060 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.5□□□□□ -0.09
Nubp1Q9R060 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.5□□□□□ -0.09
Nubp1Q9R060 Gm12644-201ENSMUST00000119935 606 ntBASIC14.5□□□□□ -0.09
Nubp1Q9R060 Gm13899-201ENSMUST00000121519 1255 ntBASIC14.5□□□□□ -0.09
Nubp1Q9R060 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nubp1Q9R060 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.5□□□□□ -0.09
Nubp1Q9R060 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC14.5□□□□□ -0.09
Nubp1Q9R060 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nubp1Q9R060 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.5□□□□□ -0.09
Nubp1Q9R060 Gm2756-201ENSMUST00000195851 400 ntBASIC14.5□□□□□ -0.09
Nubp1Q9R060 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Nubp1Q9R060 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nubp1Q9R060 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nubp1Q9R060 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nubp1Q9R060 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nubp1Q9R060 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
Nubp1Q9R060 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nubp1Q9R060 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Nubp1Q9R060 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nubp1Q9R060 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nubp1Q9R060 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nubp1Q9R060 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nubp1Q9R060 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nubp1Q9R060 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms