Protein–RNA interactions for Protein: Q9QXZ7

Nr2e3, Photoreceptor-specific nuclear receptor, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr2e3Q9QXZ7 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nr2e3Q9QXZ7 AA414768-201ENSMUST00000121924 1257 ntBASIC18.81■□□□□ 0.6
Nr2e3Q9QXZ7 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC18.81■□□□□ 0.6
Nr2e3Q9QXZ7 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nr2e3Q9QXZ7 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Nr2e3Q9QXZ7 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Nr2e3Q9QXZ7 Gm29707-201ENSMUST00000196325 491 ntBASIC18.81■□□□□ 0.6
Nr2e3Q9QXZ7 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nr2e3Q9QXZ7 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nr2e3Q9QXZ7 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nr2e3Q9QXZ7 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nr2e3Q9QXZ7 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Nr2e3Q9QXZ7 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nr2e3Q9QXZ7 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nr2e3Q9QXZ7 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Nr2e3Q9QXZ7 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nr2e3Q9QXZ7 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nr2e3Q9QXZ7 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nr2e3Q9QXZ7 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Nr2e3Q9QXZ7 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.8■□□□□ 0.6
Nr2e3Q9QXZ7 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nr2e3Q9QXZ7 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC18.8■□□□□ 0.6
Nr2e3Q9QXZ7 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nr2e3Q9QXZ7 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nr2e3Q9QXZ7 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nr2e3Q9QXZ7 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.8■□□□□ 0.6
Nr2e3Q9QXZ7 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Nr2e3Q9QXZ7 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.8■□□□□ 0.6
Nr2e3Q9QXZ7 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nr2e3Q9QXZ7 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nr2e3Q9QXZ7 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Nr2e3Q9QXZ7 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nr2e3Q9QXZ7 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Nr2e3Q9QXZ7 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nr2e3Q9QXZ7 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nr2e3Q9QXZ7 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nr2e3Q9QXZ7 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nr2e3Q9QXZ7 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nr2e3Q9QXZ7 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nr2e3Q9QXZ7 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nr2e3Q9QXZ7 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nr2e3Q9QXZ7 Mir770-201ENSMUST00000103252 94 ntBASIC18.79■□□□□ 0.6
Nr2e3Q9QXZ7 Gm6345-202ENSMUST00000180900 204 ntBASIC18.79■□□□□ 0.6
Nr2e3Q9QXZ7 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC18.79■□□□□ 0.6
Nr2e3Q9QXZ7 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nr2e3Q9QXZ7 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nr2e3Q9QXZ7 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.79■□□□□ 0.6
Nr2e3Q9QXZ7 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nr2e3Q9QXZ7 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nr2e3Q9QXZ7 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nr2e3Q9QXZ7 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nr2e3Q9QXZ7 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nr2e3Q9QXZ7 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nr2e3Q9QXZ7 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Nr2e3Q9QXZ7 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nr2e3Q9QXZ7 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nr2e3Q9QXZ7 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nr2e3Q9QXZ7 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nr2e3Q9QXZ7 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nr2e3Q9QXZ7 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nr2e3Q9QXZ7 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nr2e3Q9QXZ7 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.78■□□□□ 0.6
Nr2e3Q9QXZ7 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nr2e3Q9QXZ7 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nr2e3Q9QXZ7 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nr2e3Q9QXZ7 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Nr2e3Q9QXZ7 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nr2e3Q9QXZ7 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Nr2e3Q9QXZ7 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nr2e3Q9QXZ7 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Nr2e3Q9QXZ7 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nr2e3Q9QXZ7 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC18.78■□□□□ 0.6
Nr2e3Q9QXZ7 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC18.78■□□□□ 0.6
Nr2e3Q9QXZ7 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Nr2e3Q9QXZ7 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Nr2e3Q9QXZ7 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nr2e3Q9QXZ7 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nr2e3Q9QXZ7 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nr2e3Q9QXZ7 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nr2e3Q9QXZ7 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Nr2e3Q9QXZ7 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nr2e3Q9QXZ7 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nr2e3Q9QXZ7 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nr2e3Q9QXZ7 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nr2e3Q9QXZ7 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nr2e3Q9QXZ7 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nr2e3Q9QXZ7 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nr2e3Q9QXZ7 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nr2e3Q9QXZ7 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC18.77■□□□□ 0.6
Nr2e3Q9QXZ7 Gm25016-201ENSMUST00000158399 131 ntBASIC18.77■□□□□ 0.6
Nr2e3Q9QXZ7 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
Nr2e3Q9QXZ7 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
Nr2e3Q9QXZ7 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC18.77■□□□□ 0.6
Nr2e3Q9QXZ7 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nr2e3Q9QXZ7 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nr2e3Q9QXZ7 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nr2e3Q9QXZ7 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC18.77■□□□□ 0.6
Nr2e3Q9QXZ7 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nr2e3Q9QXZ7 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nr2e3Q9QXZ7 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.77■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms