Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Msh5Q9QUM7 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Msh5Q9QUM7 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Msh5Q9QUM7 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Msh5Q9QUM7 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Msh5Q9QUM7 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
Msh5Q9QUM7 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Msh5Q9QUM7 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Msh5Q9QUM7 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Msh5Q9QUM7 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Msh5Q9QUM7 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Msh5Q9QUM7 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Msh5Q9QUM7 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Msh5Q9QUM7 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Msh5Q9QUM7 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Msh5Q9QUM7 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Msh5Q9QUM7 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Msh5Q9QUM7 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.98■□□□□ 0.31
Msh5Q9QUM7 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Msh5Q9QUM7 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.98■□□□□ 0.31
Msh5Q9QUM7 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
Msh5Q9QUM7 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Msh5Q9QUM7 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.98■□□□□ 0.31
Msh5Q9QUM7 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.98■□□□□ 0.31
Msh5Q9QUM7 AC124408.1-201ENSMUST00000228938 707 ntBASIC16.98■□□□□ 0.31
Msh5Q9QUM7 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Msh5Q9QUM7 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Msh5Q9QUM7 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.98■□□□□ 0.31
Msh5Q9QUM7 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Msh5Q9QUM7 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
Msh5Q9QUM7 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Msh5Q9QUM7 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Msh5Q9QUM7 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Msh5Q9QUM7 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Msh5Q9QUM7 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Msh5Q9QUM7 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Msh5Q9QUM7 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.97■□□□□ 0.31
Msh5Q9QUM7 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Msh5Q9QUM7 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Msh5Q9QUM7 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Msh5Q9QUM7 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Msh5Q9QUM7 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.97■□□□□ 0.31
Msh5Q9QUM7 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Msh5Q9QUM7 Mir5122-201ENSMUST00000175004 89 ntBASIC16.97■□□□□ 0.31
Msh5Q9QUM7 Letm2-206ENSMUST00000210234 837 ntTSL 5 BASIC16.97■□□□□ 0.31
Msh5Q9QUM7 Timm23-208ENSMUST00000226683 750 ntBASIC16.97■□□□□ 0.31
Msh5Q9QUM7 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Msh5Q9QUM7 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Msh5Q9QUM7 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Msh5Q9QUM7 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Msh5Q9QUM7 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Msh5Q9QUM7 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Msh5Q9QUM7 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Msh5Q9QUM7 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Msh5Q9QUM7 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Msh5Q9QUM7 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Msh5Q9QUM7 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Msh5Q9QUM7 Dancr-204ENSMUST00000132389 2347 ntBASIC16.97■□□□□ 0.31
Msh5Q9QUM7 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Msh5Q9QUM7 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Msh5Q9QUM7 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Msh5Q9QUM7 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Msh5Q9QUM7 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
Msh5Q9QUM7 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.97■□□□□ 0.31
Msh5Q9QUM7 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Msh5Q9QUM7 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.96■□□□□ 0.31
Msh5Q9QUM7 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Msh5Q9QUM7 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Msh5Q9QUM7 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Msh5Q9QUM7 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Msh5Q9QUM7 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Msh5Q9QUM7 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Msh5Q9QUM7 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Msh5Q9QUM7 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Msh5Q9QUM7 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Msh5Q9QUM7 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Msh5Q9QUM7 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Msh5Q9QUM7 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Msh5Q9QUM7 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.96■□□□□ 0.31
Msh5Q9QUM7 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Msh5Q9QUM7 AC140209.1-201ENSMUST00000227875 284 ntBASIC16.96■□□□□ 0.31
Msh5Q9QUM7 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Msh5Q9QUM7 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.96■□□□□ 0.31
Msh5Q9QUM7 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.96■□□□□ 0.31
Msh5Q9QUM7 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Msh5Q9QUM7 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Msh5Q9QUM7 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Msh5Q9QUM7 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Msh5Q9QUM7 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Msh5Q9QUM7 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Msh5Q9QUM7 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Msh5Q9QUM7 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Msh5Q9QUM7 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Msh5Q9QUM7 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Msh5Q9QUM7 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Msh5Q9QUM7 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Msh5Q9QUM7 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Msh5Q9QUM7 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.95■□□□□ 0.3
Msh5Q9QUM7 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Msh5Q9QUM7 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms