Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rrp8Q9DB85 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rrp8Q9DB85 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rrp8Q9DB85 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Rrp8Q9DB85 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Rrp8Q9DB85 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rrp8Q9DB85 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.26■□□□□ 0.19
Rrp8Q9DB85 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.26■□□□□ 0.19
Rrp8Q9DB85 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rrp8Q9DB85 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rrp8Q9DB85 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rrp8Q9DB85 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rrp8Q9DB85 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC16.25■□□□□ 0.19
Rrp8Q9DB85 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rrp8Q9DB85 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Rrp8Q9DB85 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.25■□□□□ 0.19
Rrp8Q9DB85 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rrp8Q9DB85 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rrp8Q9DB85 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rrp8Q9DB85 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rrp8Q9DB85 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Rrp8Q9DB85 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rrp8Q9DB85 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.25■□□□□ 0.19
Rrp8Q9DB85 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rrp8Q9DB85 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rrp8Q9DB85 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Rrp8Q9DB85 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rrp8Q9DB85 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Rrp8Q9DB85 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rrp8Q9DB85 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Rrp8Q9DB85 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rrp8Q9DB85 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rrp8Q9DB85 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rrp8Q9DB85 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Rrp8Q9DB85 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rrp8Q9DB85 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rrp8Q9DB85 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rrp8Q9DB85 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rrp8Q9DB85 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rrp8Q9DB85 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rrp8Q9DB85 Gm7862-201ENSMUST00000121461 292 ntBASIC16.24■□□□□ 0.19
Rrp8Q9DB85 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.24■□□□□ 0.19
Rrp8Q9DB85 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.24■□□□□ 0.19
Rrp8Q9DB85 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rrp8Q9DB85 Gm6296-201ENSMUST00000222599 943 ntBASIC16.24■□□□□ 0.19
Rrp8Q9DB85 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rrp8Q9DB85 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rrp8Q9DB85 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rrp8Q9DB85 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rrp8Q9DB85 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rrp8Q9DB85 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rrp8Q9DB85 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.24■□□□□ 0.19
Rrp8Q9DB85 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.24■□□□□ 0.19
Rrp8Q9DB85 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rrp8Q9DB85 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Rrp8Q9DB85 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rrp8Q9DB85 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.24■□□□□ 0.19
Rrp8Q9DB85 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.23■□□□□ 0.19
Rrp8Q9DB85 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rrp8Q9DB85 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rrp8Q9DB85 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rrp8Q9DB85 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.23■□□□□ 0.19
Rrp8Q9DB85 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.23■□□□□ 0.19
Rrp8Q9DB85 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.23■□□□□ 0.19
Rrp8Q9DB85 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.23■□□□□ 0.19
Rrp8Q9DB85 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
Rrp8Q9DB85 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rrp8Q9DB85 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Rrp8Q9DB85 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rrp8Q9DB85 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rrp8Q9DB85 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rrp8Q9DB85 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rrp8Q9DB85 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Rrp8Q9DB85 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rrp8Q9DB85 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rrp8Q9DB85 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rrp8Q9DB85 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rrp8Q9DB85 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rrp8Q9DB85 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rrp8Q9DB85 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rrp8Q9DB85 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Rrp8Q9DB85 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rrp8Q9DB85 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Rrp8Q9DB85 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rrp8Q9DB85 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.22■□□□□ 0.19
Rrp8Q9DB85 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.22■□□□□ 0.19
Rrp8Q9DB85 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16.22■□□□□ 0.19
Rrp8Q9DB85 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rrp8Q9DB85 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC16.22■□□□□ 0.19
Rrp8Q9DB85 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.22■□□□□ 0.19
Rrp8Q9DB85 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.22■□□□□ 0.19
Rrp8Q9DB85 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rrp8Q9DB85 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.22■□□□□ 0.19
Rrp8Q9DB85 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.22■□□□□ 0.19
Rrp8Q9DB85 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Rrp8Q9DB85 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rrp8Q9DB85 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rrp8Q9DB85 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rrp8Q9DB85 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rrp8Q9DB85 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms