Protein–RNA interactions for Protein: Q9D701

Upk3bl1, Uroplakin-3b-like protein 1, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bl1Q9D701 Gm42778-201ENSMUST00000199644 553 ntBASIC15.19■□□□□ 0.02
Upk3bl1Q9D701 Zfp783-201ENSMUST00000095946 670 ntBASIC15.19■□□□□ 0.02
Upk3bl1Q9D701 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
Upk3bl1Q9D701 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Upk3bl1Q9D701 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Upk3bl1Q9D701 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Upk3bl1Q9D701 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Upk3bl1Q9D701 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Upk3bl1Q9D701 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Upk3bl1Q9D701 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Upk3bl1Q9D701 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Upk3bl1Q9D701 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Upk3bl1Q9D701 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Upk3bl1Q9D701 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Upk3bl1Q9D701 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Upk3bl1Q9D701 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Upk3bl1Q9D701 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Upk3bl1Q9D701 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Upk3bl1Q9D701 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Upk3bl1Q9D701 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Upk3bl1Q9D701 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Upk3bl1Q9D701 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Upk3bl1Q9D701 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Upk3bl1Q9D701 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Upk3bl1Q9D701 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Upk3bl1Q9D701 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Upk3bl1Q9D701 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Upk3bl1Q9D701 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Upk3bl1Q9D701 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Upk3bl1Q9D701 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Upk3bl1Q9D701 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Upk3bl1Q9D701 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Upk3bl1Q9D701 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.17■□□□□ 0.02
Upk3bl1Q9D701 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Upk3bl1Q9D701 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Upk3bl1Q9D701 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Upk3bl1Q9D701 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Upk3bl1Q9D701 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Upk3bl1Q9D701 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Upk3bl1Q9D701 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Upk3bl1Q9D701 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Upk3bl1Q9D701 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Upk3bl1Q9D701 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC15.17■□□□□ 0.02
Upk3bl1Q9D701 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Upk3bl1Q9D701 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.17■□□□□ 0.02
Upk3bl1Q9D701 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Upk3bl1Q9D701 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Upk3bl1Q9D701 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Upk3bl1Q9D701 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Upk3bl1Q9D701 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.17■□□□□ 0.02
Upk3bl1Q9D701 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.17■□□□□ 0.02
Upk3bl1Q9D701 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Upk3bl1Q9D701 Gm13509-201ENSMUST00000119733 1308 ntBASIC15.17■□□□□ 0.02
Upk3bl1Q9D701 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
Upk3bl1Q9D701 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Upk3bl1Q9D701 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Upk3bl1Q9D701 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Upk3bl1Q9D701 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Upk3bl1Q9D701 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Upk3bl1Q9D701 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Upk3bl1Q9D701 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Upk3bl1Q9D701 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Upk3bl1Q9D701 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Upk3bl1Q9D701 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Upk3bl1Q9D701 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Upk3bl1Q9D701 Gm2399-201ENSMUST00000104944 225 ntBASIC15.16■□□□□ 0.02
Upk3bl1Q9D701 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Upk3bl1Q9D701 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Upk3bl1Q9D701 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC15.16■□□□□ 0.02
Upk3bl1Q9D701 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Upk3bl1Q9D701 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Upk3bl1Q9D701 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC15.16■□□□□ 0.02
Upk3bl1Q9D701 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.16■□□□□ 0.02
Upk3bl1Q9D701 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC15.16■□□□□ 0.02
Upk3bl1Q9D701 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC15.16■□□□□ 0.02
Upk3bl1Q9D701 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Upk3bl1Q9D701 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Upk3bl1Q9D701 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Upk3bl1Q9D701 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Upk3bl1Q9D701 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Upk3bl1Q9D701 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Upk3bl1Q9D701 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Upk3bl1Q9D701 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Upk3bl1Q9D701 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Upk3bl1Q9D701 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Upk3bl1Q9D701 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Upk3bl1Q9D701 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Upk3bl1Q9D701 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Upk3bl1Q9D701 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Upk3bl1Q9D701 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Upk3bl1Q9D701 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Upk3bl1Q9D701 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Upk3bl1Q9D701 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Upk3bl1Q9D701 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC15.15■□□□□ 0.02
Upk3bl1Q9D701 AC153937.1-201ENSMUST00000218734 412 ntBASIC15.15■□□□□ 0.02
Upk3bl1Q9D701 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Upk3bl1Q9D701 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Upk3bl1Q9D701 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Upk3bl1Q9D701 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Upk3bl1Q9D701 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms