Protein–RNA interactions for Protein: Q9D6I0

Rtl8c, Cxx1c protein, mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl8cQ9D6I0 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rtl8cQ9D6I0 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Rtl8cQ9D6I0 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rtl8cQ9D6I0 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rtl8cQ9D6I0 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rtl8cQ9D6I0 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rtl8cQ9D6I0 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rtl8cQ9D6I0 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.87□□□□□ -0.03
Rtl8cQ9D6I0 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rtl8cQ9D6I0 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rtl8cQ9D6I0 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rtl8cQ9D6I0 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rtl8cQ9D6I0 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rtl8cQ9D6I0 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rtl8cQ9D6I0 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Rtl8cQ9D6I0 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Rtl8cQ9D6I0 Gm11539-201ENSMUST00000119837 557 ntBASIC14.87□□□□□ -0.03
Rtl8cQ9D6I0 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rtl8cQ9D6I0 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rtl8cQ9D6I0 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC14.87□□□□□ -0.03
Rtl8cQ9D6I0 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Rtl8cQ9D6I0 Gm37055-201ENSMUST00000191866 133 ntBASIC14.87□□□□□ -0.03
Rtl8cQ9D6I0 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Rtl8cQ9D6I0 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rtl8cQ9D6I0 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rtl8cQ9D6I0 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rtl8cQ9D6I0 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Rtl8cQ9D6I0 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rtl8cQ9D6I0 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rtl8cQ9D6I0 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14.87□□□□□ -0.03
Rtl8cQ9D6I0 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rtl8cQ9D6I0 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rtl8cQ9D6I0 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Rtl8cQ9D6I0 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Rtl8cQ9D6I0 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rtl8cQ9D6I0 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rtl8cQ9D6I0 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rtl8cQ9D6I0 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rtl8cQ9D6I0 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rtl8cQ9D6I0 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Rtl8cQ9D6I0 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rtl8cQ9D6I0 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rtl8cQ9D6I0 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rtl8cQ9D6I0 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rtl8cQ9D6I0 Gm13186-201ENSMUST00000118031 316 ntBASIC14.86□□□□□ -0.03
Rtl8cQ9D6I0 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rtl8cQ9D6I0 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rtl8cQ9D6I0 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Rtl8cQ9D6I0 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.86□□□□□ -0.03
Rtl8cQ9D6I0 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rtl8cQ9D6I0 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rtl8cQ9D6I0 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rtl8cQ9D6I0 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.86□□□□□ -0.03
Rtl8cQ9D6I0 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Rtl8cQ9D6I0 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC14.86□□□□□ -0.03
Rtl8cQ9D6I0 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Rtl8cQ9D6I0 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rtl8cQ9D6I0 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rtl8cQ9D6I0 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rtl8cQ9D6I0 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rtl8cQ9D6I0 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rtl8cQ9D6I0 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rtl8cQ9D6I0 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14.85□□□□□ -0.03
Rtl8cQ9D6I0 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.85□□□□□ -0.03
Rtl8cQ9D6I0 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Rtl8cQ9D6I0 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rtl8cQ9D6I0 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rtl8cQ9D6I0 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rtl8cQ9D6I0 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rtl8cQ9D6I0 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC14.85□□□□□ -0.03
Rtl8cQ9D6I0 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rtl8cQ9D6I0 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.85□□□□□ -0.03
Rtl8cQ9D6I0 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rtl8cQ9D6I0 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.85□□□□□ -0.03
Rtl8cQ9D6I0 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rtl8cQ9D6I0 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rtl8cQ9D6I0 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Rtl8cQ9D6I0 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.85□□□□□ -0.03
Rtl8cQ9D6I0 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rtl8cQ9D6I0 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.85□□□□□ -0.03
Rtl8cQ9D6I0 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rtl8cQ9D6I0 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rtl8cQ9D6I0 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rtl8cQ9D6I0 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rtl8cQ9D6I0 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.84□□□□□ -0.03
Rtl8cQ9D6I0 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rtl8cQ9D6I0 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Rtl8cQ9D6I0 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rtl8cQ9D6I0 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.84□□□□□ -0.03
Rtl8cQ9D6I0 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14.84□□□□□ -0.03
Rtl8cQ9D6I0 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC14.84□□□□□ -0.03
Rtl8cQ9D6I0 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rtl8cQ9D6I0 AC159205.6-201ENSMUST00000224935 887 ntBASIC14.84□□□□□ -0.03
Rtl8cQ9D6I0 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.84□□□□□ -0.03
Rtl8cQ9D6I0 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.84□□□□□ -0.03
Rtl8cQ9D6I0 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rtl8cQ9D6I0 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Rtl8cQ9D6I0 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rtl8cQ9D6I0 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rtl8cQ9D6I0 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms