Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vps33aQ9D2N9 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vps33aQ9D2N9 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Vps33aQ9D2N9 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vps33aQ9D2N9 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Vps33aQ9D2N9 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vps33aQ9D2N9 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vps33aQ9D2N9 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Vps33aQ9D2N9 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
Vps33aQ9D2N9 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Vps33aQ9D2N9 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vps33aQ9D2N9 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vps33aQ9D2N9 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vps33aQ9D2N9 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vps33aQ9D2N9 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vps33aQ9D2N9 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vps33aQ9D2N9 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vps33aQ9D2N9 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Vps33aQ9D2N9 Reep4-203ENSMUST00000226563 1444 ntBASIC17.69■□□□□ 0.42
Vps33aQ9D2N9 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Vps33aQ9D2N9 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vps33aQ9D2N9 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vps33aQ9D2N9 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vps33aQ9D2N9 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vps33aQ9D2N9 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vps33aQ9D2N9 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vps33aQ9D2N9 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vps33aQ9D2N9 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Vps33aQ9D2N9 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vps33aQ9D2N9 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vps33aQ9D2N9 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vps33aQ9D2N9 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.68■□□□□ 0.42
Vps33aQ9D2N9 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vps33aQ9D2N9 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vps33aQ9D2N9 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vps33aQ9D2N9 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vps33aQ9D2N9 Gm43352-201ENSMUST00000196419 3065 ntBASIC17.68■□□□□ 0.42
Vps33aQ9D2N9 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
Vps33aQ9D2N9 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vps33aQ9D2N9 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Vps33aQ9D2N9 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vps33aQ9D2N9 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vps33aQ9D2N9 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vps33aQ9D2N9 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vps33aQ9D2N9 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vps33aQ9D2N9 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vps33aQ9D2N9 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vps33aQ9D2N9 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vps33aQ9D2N9 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps33aQ9D2N9 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps33aQ9D2N9 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps33aQ9D2N9 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps33aQ9D2N9 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Vps33aQ9D2N9 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps33aQ9D2N9 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps33aQ9D2N9 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps33aQ9D2N9 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps33aQ9D2N9 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.67■□□□□ 0.42
Vps33aQ9D2N9 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.67■□□□□ 0.42
Vps33aQ9D2N9 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps33aQ9D2N9 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
Vps33aQ9D2N9 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps33aQ9D2N9 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Vps33aQ9D2N9 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps33aQ9D2N9 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps33aQ9D2N9 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.67■□□□□ 0.42
Vps33aQ9D2N9 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Vps33aQ9D2N9 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps33aQ9D2N9 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps33aQ9D2N9 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps33aQ9D2N9 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Vps33aQ9D2N9 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Vps33aQ9D2N9 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps33aQ9D2N9 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.66■□□□□ 0.42
Vps33aQ9D2N9 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps33aQ9D2N9 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps33aQ9D2N9 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps33aQ9D2N9 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vps33aQ9D2N9 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps33aQ9D2N9 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Vps33aQ9D2N9 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vps33aQ9D2N9 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vps33aQ9D2N9 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps33aQ9D2N9 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Vps33aQ9D2N9 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps33aQ9D2N9 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vps33aQ9D2N9 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Vps33aQ9D2N9 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Vps33aQ9D2N9 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps33aQ9D2N9 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Vps33aQ9D2N9 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps33aQ9D2N9 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Vps33aQ9D2N9 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Vps33aQ9D2N9 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Vps33aQ9D2N9 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps33aQ9D2N9 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.65■□□□□ 0.42
Vps33aQ9D2N9 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps33aQ9D2N9 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps33aQ9D2N9 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps33aQ9D2N9 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms