Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Gm11927-201ENSMUST00000118472 759 ntBASIC16.65■□□□□ 0.26
Trim42Q9D2H5 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
Trim42Q9D2H5 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Trim42Q9D2H5 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim42Q9D2H5 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim42Q9D2H5 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim42Q9D2H5 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim42Q9D2H5 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim42Q9D2H5 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Trim42Q9D2H5 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim42Q9D2H5 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim42Q9D2H5 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim42Q9D2H5 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Trim42Q9D2H5 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim42Q9D2H5 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Trim42Q9D2H5 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Trim42Q9D2H5 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim42Q9D2H5 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim42Q9D2H5 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Trim42Q9D2H5 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Trim42Q9D2H5 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Trim42Q9D2H5 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim42Q9D2H5 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim42Q9D2H5 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.64■□□□□ 0.25
Trim42Q9D2H5 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim42Q9D2H5 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim42Q9D2H5 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim42Q9D2H5 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim42Q9D2H5 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim42Q9D2H5 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim42Q9D2H5 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim42Q9D2H5 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim42Q9D2H5 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim42Q9D2H5 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Trim42Q9D2H5 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim42Q9D2H5 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim42Q9D2H5 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim42Q9D2H5 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
Trim42Q9D2H5 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim42Q9D2H5 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.63■□□□□ 0.25
Trim42Q9D2H5 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim42Q9D2H5 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim42Q9D2H5 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Trim42Q9D2H5 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim42Q9D2H5 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim42Q9D2H5 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim42Q9D2H5 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim42Q9D2H5 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim42Q9D2H5 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim42Q9D2H5 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim42Q9D2H5 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim42Q9D2H5 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim42Q9D2H5 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.63■□□□□ 0.25
Trim42Q9D2H5 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim42Q9D2H5 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC16.63■□□□□ 0.25
Trim42Q9D2H5 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim42Q9D2H5 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Trim42Q9D2H5 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim42Q9D2H5 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Trim42Q9D2H5 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim42Q9D2H5 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim42Q9D2H5 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim42Q9D2H5 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim42Q9D2H5 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim42Q9D2H5 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim42Q9D2H5 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.63■□□□□ 0.25
Trim42Q9D2H5 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.63■□□□□ 0.25
Trim42Q9D2H5 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trim42Q9D2H5 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim42Q9D2H5 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.62■□□□□ 0.25
Trim42Q9D2H5 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim42Q9D2H5 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim42Q9D2H5 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim42Q9D2H5 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim42Q9D2H5 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.62■□□□□ 0.25
Trim42Q9D2H5 Gm6576-201ENSMUST00000169678 883 ntBASIC16.62■□□□□ 0.25
Trim42Q9D2H5 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim42Q9D2H5 Gm42642-201ENSMUST00000200683 355 ntBASIC16.62■□□□□ 0.25
Trim42Q9D2H5 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim42Q9D2H5 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Trim42Q9D2H5 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim42Q9D2H5 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim42Q9D2H5 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim42Q9D2H5 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.62■□□□□ 0.25
Trim42Q9D2H5 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim42Q9D2H5 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim42Q9D2H5 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Trim42Q9D2H5 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim42Q9D2H5 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim42Q9D2H5 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trim42Q9D2H5 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.61■□□□□ 0.25
Trim42Q9D2H5 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim42Q9D2H5 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Trim42Q9D2H5 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim42Q9D2H5 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trim42Q9D2H5 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim42Q9D2H5 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.61■□□□□ 0.25
Trim42Q9D2H5 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim42Q9D2H5 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim42Q9D2H5 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms